Uses of DataElement in biouml.model

 

Subinterfaces of DataElement in biouml.model
interface	ModuleType

 

Methods in biouml.model that return DataElement
DataElement	Compartment.get(String name)
DataElement	Compartment.put(DataElement obj)
DataElement	Module.getKernel(Class c, String name)
DataElement	Module.getKernel(String relativeName)

 

Methods in biouml.model with parameters of type DataElement
boolean	Compartment.contains(DataElement de)
DataElement	Compartment.put(DataElement obj)
static Module	Module.getModule(DataElement element)
void	Module.putKernel(DataElement kernel)

 

Uses of DataElement in biouml.model.dynamics

 

Methods in biouml.model.dynamics with parameters of type DataElement
boolean	EModel.VariableFilter.isAcceptable(DataElement de)

 

Uses of DataElement in biouml.model.util

 

Methods in biouml.model.util that return DataElement
DataElement	DiagramXmlTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	DiagramXmlTransformer.transformOutput(DataElement output)           Transform output data element to input data element.

 

Methods in biouml.model.util with parameters of type DataElement
DataElement	DiagramXmlTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	DiagramXmlTransformer.transformOutput(DataElement output)           Transform output data element to input data element.

 

Uses of DataElement in biouml.plugins.cellml

 

Methods in biouml.plugins.cellml that return DataElement
DataElement	CellMLDiagramTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	CellMLDiagramTransformer.transformOutput(DataElement output)           Writes SBML model into file.

 

Methods in biouml.plugins.cellml with parameters of type DataElement
DataElement	CellMLDiagramTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	CellMLDiagramTransformer.transformOutput(DataElement output)           Writes SBML model into file.

 

Uses of DataElement in biouml.plugins.ginsim

 

Methods in biouml.plugins.ginsim that return DataElement
DataElement	GinSimTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	GinSimTransformer.transformOutput(DataElement output)           Writes Diagram model into GXL file.

 

Methods in biouml.plugins.ginsim with parameters of type DataElement
DataElement	GinSimTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	GinSimTransformer.transformOutput(DataElement output)           Writes Diagram model into GXL file.

 

Uses of DataElement in biouml.plugins.gxl

 

Methods in biouml.plugins.gxl that return DataElement
DataElement	GxlTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	GxlTransformer.transformOutput(DataElement output)           Writes Diagram model into GXL file.

 

Methods in biouml.plugins.gxl with parameters of type DataElement
DataElement	GxlTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	GxlTransformer.transformOutput(DataElement output)           Writes Diagram model into GXL file.

 

Uses of DataElement in biouml.plugins.sbml

 

Methods in biouml.plugins.sbml that return DataElement
DataElement	SbmlDiagramTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	SbmlDiagramTransformer.transformOutput(DataElement output)           Writes SBML model into file.

 

Methods in biouml.plugins.sbml with parameters of type DataElement
DataElement	SbmlDiagramTransformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	SbmlDiagramTransformer.transformOutput(DataElement output)           Writes SBML model into file.

 

Uses of DataElement in biouml.plugins.sbw

 

Classes in biouml.plugins.sbw that implement DataElement
class	SbwServiceMethod

 

Methods in biouml.plugins.sbw that return DataElement
DataElement	SbwModule.getAt(int index)
DataElement	SbwService.getAt(int index)

 

Uses of DataElement in biouml.plugins.simulation.access

 

Methods in biouml.plugins.simulation.access that return DataElement
DataElement	SimulationResultSqlTransformer.create(ResultSet resultSet, Connection connection)
synchronized DataElement	SimulationResultTransformer.transformInput(DataElement input)
synchronized DataElement	SimulationResultTransformer.transformOutput(DataElement de)

 

Methods in biouml.plugins.simulation.access with parameters of type DataElement
void	SimulationResultSqlTransformer.addInsertCommands(Statement statement, DataElement de)
synchronized DataElement	SimulationResultTransformer.transformInput(DataElement input)
synchronized DataElement	SimulationResultTransformer.transformOutput(DataElement de)

 

Uses of DataElement in biouml.plugins.simulation.plot.access

 

Methods in biouml.plugins.simulation.plot.access that return DataElement
DataElement	PlotSqlTransformer.create(ResultSet resultSet, Connection connection)
synchronized DataElement	PlotTransformer.transformInput(DataElement input)
synchronized DataElement	PlotTransformer.transformOutput(DataElement de)

 

Methods in biouml.plugins.simulation.plot.access with parameters of type DataElement
void	PlotSqlTransformer.addInsertCommands(Statement statement, DataElement de)
synchronized DataElement	PlotTransformer.transformInput(DataElement input)
synchronized DataElement	PlotTransformer.transformOutput(DataElement de)

 

Uses of DataElement in biouml.standard.filter

 

Methods in biouml.standard.filter with parameters of type DataElement
String	BiopolimerDiagramFilter.CellTypeFilter.getValue(DataElement de)
String	BiopolimerDiagramFilter.InducerFilter.getValue(DataElement de)
String	BiopolimerDiagramFilter.SpeciesFilter.getValue(DataElement de)
abstract String	ValueActionFilter.getValue(DataElement de)

 

Uses of DataElement in biouml.standard.type

 

Subinterfaces of DataElement in biouml.standard.type
interface	Base           General interface to be implemented by all classes to be used as BioUML diagram elements.

 

Methods in biouml.standard.type that return DataElement
DataElement	Reaction.get(String name)
DataElement	Reaction.put(DataElement obj)

 

Methods in biouml.standard.type with parameters of type DataElement
boolean	Reaction.contains(DataElement de)
DataElement	Reaction.put(DataElement obj)

 

Uses of DataElement in biouml.standard.type.access

 

Methods in biouml.standard.type.access that return DataElement
DataElement	ConceptSqlTransformer.create(ResultSet resultSet, Connection connection)
DataElement	DiagramSqlTransformer.create(ResultSet resultSet, Connection connection)
DataElement	ReactionSqlTransformer.create(ResultSet resultSet, Connection connection)
synchronized DataElement	ReactionTransformer.transformInput(DataElement input)           Read Reaction object from Entry object.
synchronized DataElement	ReactionTransformer.transformOutput(DataElement input)           Write Reaction object to Entry object.
DataElement	RelationTypeSqlTransformer.create(ResultSet resultSet, Connection connection)
DataElement	SpeciesSqlTransformer.create(ResultSet resultSet, Connection connection)
DataElement	UnitSqlTransformer.create(ResultSet resultSet, Connection connection)

 

Methods in biouml.standard.type.access with parameters of type DataElement
void	BiopolymerSqlTransformer.addInsertCommands(Statement statement, DataElement de)
void	ConceptSqlTransformer.addInsertCommands(Statement statement, DataElement de)
void	DiagramSqlTransformer.addInsertCommands(Statement statement, DataElement de)
void	ReactionSqlTransformer.addInsertCommands(Statement statement, DataElement de)
synchronized DataElement	ReactionTransformer.transformInput(DataElement input)           Read Reaction object from Entry object.
synchronized DataElement	ReactionTransformer.transformOutput(DataElement input)           Write Reaction object to Entry object.
void	RelationTypeSqlTransformer.addInsertCommands(Statement statement, DataElement de)
void	SpeciesSqlTransformer.addInsertCommands(Statement statement, DataElement de)
void	UnitSqlTransformer.addInsertCommands(Statement statement, DataElement de)

 

Uses of DataElement in ru.biosoft.access

 

Subinterfaces of DataElement in ru.biosoft.access
interface	DataCollection           DataCollection is a set of homogeneous DataElements.
interface	MutableDataElement

 

Classes in ru.biosoft.access that implement DataElement
class	DataElementSupport           Implements DataElement interface by common way.

 

Constructors in ru.biosoft.access with parameters of type DataElement

DataCollectionAddUndo.DataCollectionAddUndo(DataElement elementWillAdd, DataCollection parent)

DataCollectionRemoveUndo.DataCollectionRemoveUndo(DataElement elementWillRemove, DataCollection parent)

 

Methods in ru.biosoft.access that return DataElement
DataElement	AbstractDataCollection.get(String name)           Gets data element with specified name.
DataElement	AbstractDataCollection.put(DataElement element)           Adds the specified data element to the collection.
static DataElement	CollectionFactory.getDataElement(String relativeName, DataCollection ancestor)           Returns the DataElement with the specified name.
static DataElement	CollectionFactory.getDataElement(String completeName)           Returns the DataElement with the specified name.
DataElement	DataCollection.get(String name)           Returns the DataElement with the specified name.
DataElement	DataCollection.put(DataElement obj)           Adds the specified data element to the collection.
DataElement	DataCollectionEvent.getDataElement()
DataElement	DataCollectionUnion.get(String name)           Returns the DataElement with the specified composite name.
DataElement	DataCollectionUnion2.get(String name)
DataElement	DataCollectionUnion2.put(DataElement de)
DataElement	DataElementRef.getElement()
DataElement	DerivedDataCollection.doGet(String name)           Calls DataCollection.get(java.lang.String) method of primary collection
DataElement	FilteredDataCollection.get(String name)
DataElement	FilteredDataCollection.put(DataElement de)
DataElement	LocalRepository.getAt(int index)
DataElement	SqlTransformer.create(ResultSet resultSet, Connection connection)           Extracts all needed fields from resultSet, and create instance of DataElement.
DataElement	TransformedDataCollection.doGet(String name)           Implements specific get action for transformed data collection to get the specified by name data element from the collection.
DataElement	Transformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	Transformer.transformOutput(DataElement output)           Transform output data element to input data element.
DataElement	VectorDataCollection.getAt(int index)           Returns the element at the specified position in this data collection.
DataElement	VectorDataCollection.put(DataElement element)           Add the specified element to this data collection.
DataElement	XMLTransformer.transformInput(DataElement input)
DataElement	XMLTransformer.transformOutput(DataElement output)

 

Methods in ru.biosoft.access with parameters of type DataElement
boolean	AbstractDataCollection.contains(DataElement element)           Check if this data collection contains the specified data element.
DataElement	AbstractDataCollection.put(DataElement element)           Adds the specified data element to the collection.
static String	CollectionFactory.getRelativeName(DataElement child, DataCollection ancestor)           Returns complete name of DataElement relative its ancestor.
boolean	CompositeFilter.isAcceptable(DataElement de)           To satisfy this filter DataElement should satisfy all all subfilters.
boolean	DataCollection.contains(DataElement element)           Returns true if this data collection contains the specified element, false otherwise
DataElement	DataCollection.put(DataElement obj)           Adds the specified data element to the collection.
boolean	DataCollectionUnion.contains(DataElement element)           Returns true if this data collection contains the specified data element.
DataElement	DataCollectionUnion2.put(DataElement de)
boolean	DerivedDataCollection.contains(DataElement de)           Calls DataCollection.contains(ru.biosoft.access.DataElement) method of primary data collection.
boolean	Filter.IncludeAllFilter.isAcceptable(DataElement de)           Always return true.
boolean	Filter.IncludeNoneFilter.isAcceptable(DataElement de)           Always return false.
boolean	Filter.isAcceptable(DataElement de)           Return is data element accepted by filter.
DataElement	FilteredDataCollection.put(DataElement de)
abstract String	PatternFilter.getCheckedProperty(DataElement de)           This method should be implemented in subclasses to return property value that should match the pattern.
boolean	PatternFilter.isAcceptable(DataElement de)
void	SqlTransformer.addInsertCommands(Statement statement, DataElement de)           Adds set of SQL commands to the statement to insert data element into the table.
void	SqlTransformer.addUpdateCommands(Statement statement, DataElement de)           Adds set of SQL commands to the statement to update data element in the table.
void	SqlTransformerSupport.addUpdateCommands(Statement statement, DataElement de)           Adds set of SQL commands to the statement to update data element in the table.
void	TransformedDataCollection.doPut(DataElement element, boolean isNew)           Implements specific put action for transformed data collection to put the specified data element into the primary collection.
DataElement	Transformer.transformInput(DataElement input)           Transform input data element to output data element.
DataElement	Transformer.transformOutput(DataElement output)           Transform output data element to input data element.
DataElement	VectorDataCollection.put(DataElement element)           Add the specified element to this data collection.
DataElement	XMLTransformer.transformInput(DataElement input)
DataElement	XMLTransformer.transformOutput(DataElement output)

 

Uses of DataElement in ru.biosoft.access.repository

 

Methods in ru.biosoft.access.repository that return DataElement
DataElement	RepositoryPane.getSelectedNode()

 

Methods in ru.biosoft.access.repository with parameters of type DataElement
void	RepositoryListener.nodeClicked(DataElement node, int clickCount)
void	RepositoryListener.selectionChanged(DataElement node)

 

Uses of DataElement in ru.biosoft.access.search

 

Methods in ru.biosoft.access.search with parameters of type DataElement
boolean	ArrayPropertyValueFilter.isAcceptable(DataElement de)
boolean	PropertyValueFilter.isAcceptable(DataElement de)

 

Uses of DataElement in ru.biosoft.access.support

 

Methods in ru.biosoft.access.support that return DataElement
DataElement	DatabaseEntryTransformer.transformOutput(DataElement output)
DataElement	NewDataElementDialog.getNewDataElement()
synchronized DataElement	TagEntryTransformer.transformInput(DataElement input)
synchronized DataElement	TagEntryTransformer.transformOutput(DataElement input)

 

Methods in ru.biosoft.access.support with parameters of type DataElement
DataElement	DatabaseEntryTransformer.transformOutput(DataElement output)
synchronized DataElement	TagEntryTransformer.transformInput(DataElement input)
synchronized DataElement	TagEntryTransformer.transformOutput(DataElement input)

 

Uses of DataElement in ru.biosoft.gui

 

Methods in ru.biosoft.gui with parameters of type DataElement
void	RepositoryDocument.nodeClicked(DataElement de, int clickCount)
void	RepositoryDocument.selectionChanged(DataElement de)