Uses of Base in biouml.model

 

Constructors in biouml.model with parameters of type Base

Compartment.Compartment(DataCollection parent, Base kernel)

Compartment.Compartment(DataCollection parent, String id, Base kernel)

Diagram.Diagram(DataCollection origin, Base kernel, DiagramType type)           Creates the diagram of the specified type.

DiagramElement.DiagramElement(DataCollection parent, Base kernel)           Constructs the diagram element.

DiagramElement.DiagramElement(DataCollection parent, String name, Base kernel)           Constructs the diagram element.

Edge.Edge(DataCollection parent, Base kernel, Node input, Node output)

Edge.Edge(DataCollection parent, String id, Base kernel, Node input, Node output)

Node.Node(DataCollection parent, Base kernel)

Node.Node(DataCollection parent, String name, Base kernel)

NodeInfo.NodeInfo(Base base)

 

Methods in biouml.model that return Base
Base	DiagramElement.getKernel()
Base[]	EquivalentNodeGroup.getKernels()           We would like to get access for kernels through the property to display it in property inspector.
Base	NodeInfo.getBase()

 

Methods in biouml.model with parameters of type Base
boolean	Compartment.containsKernel(Base kernel)
List	Compartment.getKernelNodes(Base kernel)
boolean	DefaultDiagramViewBuilder.isReaction(Base kernel)
void	Diagram.setKernel(Base newKernel)
void	DiagramElement.setKernel(Base kernel)
Compartment	QueryEngineSupport.getCompartment(Node start, Base kernel)           Should return the most suitable compartment where new node should be located.

 

Uses of Base in biouml.standard

 

Methods in biouml.standard with parameters of type Base
boolean	PathwayQueryEngine.isSmallMolecule(Base base, Object obj)

 

Uses of Base in biouml.standard.diagram

 

Methods in biouml.standard.diagram with parameters of type Base
DiagramElement	PathwaySemanticController.createDiagramElement(Base kernel, Set elements)

 

Uses of Base in biouml.standard.type

 

Subinterfaces of Base in biouml.standard.type
interface	Relation           Intermediary class to generalize what is common for all relations/edges as well as to define common constants.

 

Classes in biouml.standard.type that implement Base
class	BaseSupport           Base class for all data element types.

 

Uses of Base in biouml.workbench.diagram

 

Methods in biouml.workbench.diagram that return Base
Base	DiagramElementInfo.getKernel()