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biouml.plugins.sbml
Class SbmlDiagramTransformer

ru.biosoft.access.AbstractTransformer
  |
  +--biouml.plugins.sbml.SbmlDiagramTransformer

public class SbmlDiagramTransformer
extends AbstractTransformer


Method Summary
 ClassgetInputType()
          Return class of input data element.
 ClassgetOutputType()
          Return class of output data element.
 DataElementtransformInput(DataElement input)
          Transform input data element to output data element.
 DataElementtransformOutput(DataElement output)
          Writes SBML model into file.

Methods inherited from class ru.biosoft.access.AbstractTransformer
getPrimaryCollection, getTransformedCollection, init, isInputType, isOutputType

Method Detail

getInputType

public Class getInputType()
Return class of input data element. Input data element stored in primary data collection.
Returns: Class of input data element.

getOutputType

public Class getOutputType()
Return class of output data element. Output data element stored in transformed data collection.
Returns: Class of output data element.

transformInput

public DataElement transformInput(DataElement input)
throws java.lang.Exception
Transform input data element to output data element.
Returns: Transformed data element.
Throws:
Exception - If error occured.

transformOutput

public DataElement transformOutput(DataElement output)
throws java.lang.Exception
Writes SBML model into file. Validates that file have .xml extension

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