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biouml.plugins.sbml
Class SbmlConstants

Direct Known Subclasses:
SbmlSupport
public class SbmlConstants

Field Summary
 final static StringANNOTATION_ELEMENT
           
 final static StringASSIGNEMENT_ELEMENT
           
 final static StringASSIGNEMENT_LIST_ELEMENT
           
 final static StringASSIGNEMENT_VARIABLE_ATTR
           
 final static StringBIOUML_COMPARTMENT_INFO_ELEMENT
           
 final static StringBIOUML_EDGE_INFO_ELEMENT
           
 final static StringBIOUML_NODE_INFO_ELEMENT
           
 final static StringBIOUML_SPECIE_INFO_ELEMENT
           
 final static StringBIOUML_SPECIE_TYPE_ATTR
           
 final static StringBIOUML_XMLNS_ATTR
           
 final static StringBIOUML_XMLNS_VALUE
           
 final static StringCOMPARTMENT_ATTR
           
 final static StringCOMPARTMENT_DIMENTION_ATTR
           
 final static StringCOMPARTMENT_ELEMENT
           
 final static StringCOMPARTMENT_LIST_ELEMENT
           
 final static StringCOMPARTMENT_OUTSIDE_ATTR
           
 final static StringCOMPARTMENT_VOLUME_ATTR
           
 final static StringCONSTANT_ATTR
           
 final static StringDELAY_ELEMENT
           
 final static StringDENOMINATOR_ATTR
           
 final static StringEVENT_ELEMENT
           
 final static StringEVENT_LIST_ELEMENT
           
 final static StringFORMULA_ATTR
           
 final static StringFUNCTION_DEFINITION_ELEMENT
           
 final static StringFUNCTION_LIST_ELEMENT
           
 final static StringID_ATTR
           
 final static StringKINETIC_LAW_ELEMENT
           
 final static StringMATH_ATTR
           
 final static StringMATH_ELEMENT
           
 final static StringMODEL_ELEMENT
           
 final static StringMODIFIER_LIST_ELEMENT
           
 final static StringNAME_ATTR
           
 final static StringNOTES_ELEMENT
           
 final static StringPARAMETER_ELEMENT
           
 final static StringPARAMETER_LIST_ELEMENT
           
 final static StringPARAMETER_VALUE_ATTR
           
 final static StringPRODUCT_LIST_ELEMENT
           
 final static StringPRODUCT_STUB
           
 final static StringREACTANT_LIST_ELEMENT
           
 final static StringREACTANT_STUB
           
 final static StringREACTION_ELEMENT
           
 final static StringREACTION_FAST_ATTR
           
 final static StringREACTION_LIST_ELEMENT
           
 final static StringREACTION_REVERSIBLE_ATTR
           
 final static StringRULE_ALGEBRAIC_ELEMENT
           
 final static StringRULE_ASSIGNEMENT_ELEMENT
           
 final static StringRULE_COMMENT_ATTR
           
 final static StringRULE_COMPARTMENT_VOLUME_ELEMENT
           
 final static StringRULE_FORMULA_ATTR
           
 final static StringRULE_LIST_ELEMENT
           
 final static StringRULE_PARAMETER_ELEMENT
           
 final static StringRULE_RATE_ELEMENT
           
 final static StringRULE_SPECIE_CONCENTRATION_ELEMENT
           
 final static StringRULE_VARIABLE_ATTR
           
 final static StringSBML_ELEMENT
           
 final static StringSBML_LEVEL_ATTR
           
 final static StringSBML_LEVEL_VALUE_1
           
 final static StringSBML_LEVEL_VALUE_2
           
 final static StringSBML_VERSION_ATTR
           
 final static StringSBML_VERSION_VALUE_1
           
 final static StringSBML_VERSION_VALUE_2
           
 final static StringSBML_XMLNS_VALUE
           
 final static StringSPECIE_ATTR
           
 final static StringSPECIE_ATTR_11
           
 final static StringSPECIE_BOUNDARY_CONDITION_ATTR
           
 final static StringSPECIE_CHARGE_ATTR
           
 final static StringSPECIE_DEFAULT_SUBSTANCE_UNITS
           
 final static StringSPECIE_ELEMENT
           
 final static StringSPECIE_ELEMENT_11
           
 final static StringSPECIE_HAS_ONLY_SUBSTANCE_UNITS_ATTR
           
 final static StringSPECIE_INITIAL_AMOUNT_ATTR
           
 final static StringSPECIE_INITIAL_CONCENTRATION_ATTR
           
 final static StringSPECIE_LIST_ELEMENT
           
 final static StringSPECIE_REFERENCE_ELEMENT
           
 final static StringSPECIE_REFERENCE_ELEMENT_11
           
 final static StringSPECIE_SPATIAL_SIZE_UNITS_ATTR
           
 final static StringSPECIE_SUBSTANCE_UNITS_ATTR
           
 final static StringSTOICHIOMETRY_ATTR
           
 final static StringSTOICHIOMETRY_MATH_ELEMENT
           
 final static StringSUBSTANCE_UNITS_ATTR
           
 final static StringTIME_UNITS_ATTR
           
 final static StringTRIGGER_ELEMENT
           
 final static StringTYPE_ATTR
           
 final static StringUNIT_LIST_ELEMENT
           
 final static StringUNIT_SUBSTANCE
           
 final static StringUNIT_TIME
           
 final static StringUNIT_VOLUME
           
 final static StringUNITS_ATTR
           
 final static StringXMLNS_ATTR
           

Method Summary
 final static StringDEFAULT_SPATIAL_SIZE_UNITS(int dimention)
           

Field Detail

ANNOTATION_ELEMENT

public final static String ANNOTATION_ELEMENT

ASSIGNEMENT_ELEMENT

public final static String ASSIGNEMENT_ELEMENT

ASSIGNEMENT_LIST_ELEMENT

public final static String ASSIGNEMENT_LIST_ELEMENT

ASSIGNEMENT_VARIABLE_ATTR

public final static String ASSIGNEMENT_VARIABLE_ATTR

BIOUML_COMPARTMENT_INFO_ELEMENT

public final static String BIOUML_COMPARTMENT_INFO_ELEMENT

BIOUML_EDGE_INFO_ELEMENT

public final static String BIOUML_EDGE_INFO_ELEMENT

BIOUML_NODE_INFO_ELEMENT

public final static String BIOUML_NODE_INFO_ELEMENT

BIOUML_SPECIE_INFO_ELEMENT

public final static String BIOUML_SPECIE_INFO_ELEMENT

BIOUML_SPECIE_TYPE_ATTR

public final static String BIOUML_SPECIE_TYPE_ATTR

BIOUML_XMLNS_ATTR

public final static String BIOUML_XMLNS_ATTR

BIOUML_XMLNS_VALUE

public final static String BIOUML_XMLNS_VALUE

COMPARTMENT_ATTR

public final static String COMPARTMENT_ATTR

COMPARTMENT_DIMENTION_ATTR

public final static String COMPARTMENT_DIMENTION_ATTR

COMPARTMENT_ELEMENT

public final static String COMPARTMENT_ELEMENT

COMPARTMENT_LIST_ELEMENT

public final static String COMPARTMENT_LIST_ELEMENT

COMPARTMENT_OUTSIDE_ATTR

public final static String COMPARTMENT_OUTSIDE_ATTR

COMPARTMENT_VOLUME_ATTR

public final static String COMPARTMENT_VOLUME_ATTR

CONSTANT_ATTR

public final static String CONSTANT_ATTR

DELAY_ELEMENT

public final static String DELAY_ELEMENT

DENOMINATOR_ATTR

public final static String DENOMINATOR_ATTR

EVENT_ELEMENT

public final static String EVENT_ELEMENT

EVENT_LIST_ELEMENT

public final static String EVENT_LIST_ELEMENT

FORMULA_ATTR

public final static String FORMULA_ATTR

FUNCTION_DEFINITION_ELEMENT

public final static String FUNCTION_DEFINITION_ELEMENT

FUNCTION_LIST_ELEMENT

public final static String FUNCTION_LIST_ELEMENT

ID_ATTR

public final static String ID_ATTR

KINETIC_LAW_ELEMENT

public final static String KINETIC_LAW_ELEMENT

MATH_ATTR

public final static String MATH_ATTR

MATH_ELEMENT

public final static String MATH_ELEMENT

MODEL_ELEMENT

public final static String MODEL_ELEMENT

MODIFIER_LIST_ELEMENT

public final static String MODIFIER_LIST_ELEMENT

NAME_ATTR

public final static String NAME_ATTR

NOTES_ELEMENT

public final static String NOTES_ELEMENT

PARAMETER_ELEMENT

public final static String PARAMETER_ELEMENT

PARAMETER_LIST_ELEMENT

public final static String PARAMETER_LIST_ELEMENT

PARAMETER_VALUE_ATTR

public final static String PARAMETER_VALUE_ATTR

PRODUCT_LIST_ELEMENT

public final static String PRODUCT_LIST_ELEMENT

PRODUCT_STUB

public final static String PRODUCT_STUB

REACTANT_LIST_ELEMENT

public final static String REACTANT_LIST_ELEMENT

REACTANT_STUB

public final static String REACTANT_STUB

REACTION_ELEMENT

public final static String REACTION_ELEMENT

REACTION_FAST_ATTR

public final static String REACTION_FAST_ATTR

REACTION_LIST_ELEMENT

public final static String REACTION_LIST_ELEMENT

REACTION_REVERSIBLE_ATTR

public final static String REACTION_REVERSIBLE_ATTR

RULE_ALGEBRAIC_ELEMENT

public final static String RULE_ALGEBRAIC_ELEMENT

RULE_ASSIGNEMENT_ELEMENT

public final static String RULE_ASSIGNEMENT_ELEMENT

RULE_COMMENT_ATTR

public final static String RULE_COMMENT_ATTR

RULE_COMPARTMENT_VOLUME_ELEMENT

public final static String RULE_COMPARTMENT_VOLUME_ELEMENT

RULE_FORMULA_ATTR

public final static String RULE_FORMULA_ATTR

RULE_LIST_ELEMENT

public final static String RULE_LIST_ELEMENT

RULE_PARAMETER_ELEMENT

public final static String RULE_PARAMETER_ELEMENT

RULE_RATE_ELEMENT

public final static String RULE_RATE_ELEMENT

RULE_SPECIE_CONCENTRATION_ELEMENT

public final static String RULE_SPECIE_CONCENTRATION_ELEMENT

RULE_VARIABLE_ATTR

public final static String RULE_VARIABLE_ATTR

SBML_ELEMENT

public final static String SBML_ELEMENT

SBML_LEVEL_ATTR

public final static String SBML_LEVEL_ATTR

SBML_LEVEL_VALUE_1

public final static String SBML_LEVEL_VALUE_1

SBML_LEVEL_VALUE_2

public final static String SBML_LEVEL_VALUE_2

SBML_VERSION_ATTR

public final static String SBML_VERSION_ATTR

SBML_VERSION_VALUE_1

public final static String SBML_VERSION_VALUE_1

SBML_VERSION_VALUE_2

public final static String SBML_VERSION_VALUE_2

SBML_XMLNS_VALUE

public final static String SBML_XMLNS_VALUE

SPECIE_ATTR

public final static String SPECIE_ATTR

SPECIE_ATTR_11

public final static String SPECIE_ATTR_11

SPECIE_BOUNDARY_CONDITION_ATTR

public final static String SPECIE_BOUNDARY_CONDITION_ATTR

SPECIE_CHARGE_ATTR

public final static String SPECIE_CHARGE_ATTR

SPECIE_DEFAULT_SUBSTANCE_UNITS

public final static String SPECIE_DEFAULT_SUBSTANCE_UNITS

SPECIE_ELEMENT

public final static String SPECIE_ELEMENT

SPECIE_ELEMENT_11

public final static String SPECIE_ELEMENT_11

SPECIE_HAS_ONLY_SUBSTANCE_UNITS_ATTR

public final static String SPECIE_HAS_ONLY_SUBSTANCE_UNITS_ATTR

SPECIE_INITIAL_AMOUNT_ATTR

public final static String SPECIE_INITIAL_AMOUNT_ATTR

SPECIE_INITIAL_CONCENTRATION_ATTR

public final static String SPECIE_INITIAL_CONCENTRATION_ATTR

SPECIE_LIST_ELEMENT

public final static String SPECIE_LIST_ELEMENT

SPECIE_REFERENCE_ELEMENT

public final static String SPECIE_REFERENCE_ELEMENT

SPECIE_REFERENCE_ELEMENT_11

public final static String SPECIE_REFERENCE_ELEMENT_11

SPECIE_SPATIAL_SIZE_UNITS_ATTR

public final static String SPECIE_SPATIAL_SIZE_UNITS_ATTR

SPECIE_SUBSTANCE_UNITS_ATTR

public final static String SPECIE_SUBSTANCE_UNITS_ATTR

STOICHIOMETRY_ATTR

public final static String STOICHIOMETRY_ATTR

STOICHIOMETRY_MATH_ELEMENT

public final static String STOICHIOMETRY_MATH_ELEMENT

SUBSTANCE_UNITS_ATTR

public final static String SUBSTANCE_UNITS_ATTR

TIME_UNITS_ATTR

public final static String TIME_UNITS_ATTR

TRIGGER_ELEMENT

public final static String TRIGGER_ELEMENT

TYPE_ATTR

public final static String TYPE_ATTR

UNIT_LIST_ELEMENT

public final static String UNIT_LIST_ELEMENT

UNIT_SUBSTANCE

public final static String UNIT_SUBSTANCE

UNIT_TIME

public final static String UNIT_TIME

UNIT_VOLUME

public final static String UNIT_VOLUME

UNITS_ATTR

public final static String UNITS_ATTR

XMLNS_ATTR

public final static String XMLNS_ATTR
Method Detail

DEFAULT_SPATIAL_SIZE_UNITS

public final static String DEFAULT_SPATIAL_SIZE_UNITS(int dimention)

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