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## Uses of Class
biouml.standard.type.Base

Packages that use Base
biouml.model |
biouml.standard |
biouml.standard.diagram |
biouml.standard.type |
biouml.workbench.diagram |

Uses of Base in biouml.model

Constructors in biouml.model with parameters of type Base
`Compartment.Compartment(DataCollection parent, Base kernel)`
`Compartment.Compartment(DataCollection parent, String id, Base kernel)`
`Diagram.Diagram(DataCollection origin, Base kernel, DiagramType type)` Creates the diagram of the specified type.
`DiagramElement.DiagramElement(DataCollection parent, Base kernel)` Constructs the diagram element.
`DiagramElement.DiagramElement(DataCollection parent, String name, Base kernel)` Constructs the diagram element.
`Edge.Edge(DataCollection parent, Base kernel, Node input, Node output)`
`Edge.Edge(DataCollection parent, String id, Base kernel, Node input, Node output)`
`Node.Node(DataCollection parent, Base kernel)`
`Node.Node(DataCollection parent, String name, Base kernel)`
`NodeInfo.NodeInfo(Base base)`

Methods in biouml.model that return Base
`Base` | `DiagramElement.getKernel()`
`Base[]` | `EquivalentNodeGroup.getKernels()` We would like to get access for kernels through the property to display it in property inspector.
`Base` | `NodeInfo.getBase()`

Methods in biouml.model with parameters of type Base
`boolean` | `Compartment.containsKernel(Base kernel)`
`List` | `Compartment.getKernelNodes(Base kernel)`
`boolean` | `DefaultDiagramViewBuilder.isReaction(Base kernel)`
`void` | `Diagram.setKernel(Base newKernel)`
`void` | `DiagramElement.setKernel(Base kernel)`
`Compartment` | `QueryEngineSupport.getCompartment(Node start, Base kernel)` Should return the most suitable compartment where new node should be located.

Uses of Base in biouml.standard

Methods in biouml.standard with parameters of type Base
`boolean` | `PathwayQueryEngine.isSmallMolecule(Base base, Object obj)`

Uses of Base in biouml.standard.diagram

Methods in biouml.standard.diagram with parameters of type Base
`DiagramElement` | `PathwaySemanticController.createDiagramElement(Base kernel, Set elements)`

Uses of Base in biouml.standard.type

Subinterfaces of Base in biouml.standard.type
`interface` | `Relation` Intermediary class to generalize what is common for all relations/edges as well as to define common constants.

Classes in biouml.standard.type that implement Base
`class` | `BaseSupport` Base class for all data element types.

Uses of Base in biouml.workbench.diagram

Methods in biouml.workbench.diagram that return Base
`Base` | `DiagramElementInfo.getKernel()`

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