Hierarchy For All Packages

Package Hierarchies:

biouml.model, biouml.model.dynamics, biouml.model.dynamics.resources, biouml.model.htmlgen, biouml.model.util, biouml.plugins.cellml, biouml.plugins.ginsim, biouml.plugins.gxl, biouml.plugins.jgraph, biouml.plugins.matlab, biouml.plugins.matlab.resources, biouml.plugins.sbml, biouml.plugins.sbml._test, biouml.plugins.sbw, biouml.plugins.simulation, biouml.plugins.simulation.access, biouml.plugins.simulation.ae, biouml.plugins.simulation.hybrid, biouml.plugins.simulation.java, biouml.plugins.simulation.ode, biouml.plugins.simulation.plot, biouml.plugins.simulation.plot.access, biouml.plugins.simulation.resources, biouml.plugins.svg, biouml.standard, biouml.standard.diagram, biouml.standard.filter, biouml.standard.type, biouml.standard.type.access, biouml.workbench, biouml.workbench.diagram, biouml.workbench.module, biouml.workbench.resources, com.developmentontheedge.application, com.developmentontheedge.application.action, com.developmentontheedge.application.dialog, com.developmentontheedge.jobcontrol, com.developmentontheedge.jobcontrol.action, com.developmentontheedge.log, com.developmentontheedge.print, ru.biosoft.access, ru.biosoft.access.repository, ru.biosoft.access.search, ru.biosoft.access.support, ru.biosoft.graphics, ru.biosoft.graphics.editor, ru.biosoft.graphics.font, ru.biosoft.gui, ru.biosoft.gui.resources, ru.biosoft.gui.wizard, ru.biosoft.math, ru.biosoft.math.model, ru.biosoft.math.parser, ru.biosoft.math.view, ru.biosoft.math.xml, ru.biosoft.plugins, ru.biosoft.plugins.javascript, ru.biosoft.util, ru.biosoft.workbench

Class Hierarchy

• class java.lang.Object
  • class javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
    • class ru.biosoft.workbench.AboutAction
    • class com.developmentontheedge.application.action.ApplicationAction
      • class com.developmentontheedge.application.action.ApplicationAction.ActionAboutDialog
      • class com.developmentontheedge.application.action.ApplicationAction.ActionExit
      • class com.developmentontheedge.application.action.ApplicationAction.ActionHelp
      • class com.developmentontheedge.application.action.ApplicationAction.ActionPrint
      • class com.developmentontheedge.application.action.ApplicationAction.ActionPrintPreview
      • class com.developmentontheedge.application.action.ApplicationAction.ActionPrintSetup
    • class biouml.workbench.diagram.CloseDiagramAction
    • class biouml.workbench.diagram.ConvertDiagramAction
    • class ru.biosoft.access.search.DataSearchAction
    • class biouml.workbench.diagram.ExportDiagramAction
    • class biouml.workbench.module.ExportModuleAction
    • class biouml.model.htmlgen.GenerateHTMLAction
    • class ru.biosoft.workbench.HelpAction
    • class biouml.workbench.diagram.ImportDiagramAction
    • class ru.biosoft.graphics.editor.InsertAction
    • class com.developmentontheedge.jobcontrol.action.JobAction
    • class biouml.workbench.module.ModuleSetupAction
    • class biouml.workbench.NewDataElementAction
    • class biouml.workbench.diagram.NewDiagramAction
    • class biouml.workbench.module.NewModuleAction
    • class biouml.workbench.diagram.OpenDiagramAction
    • class biouml.workbench.PreferencesAction
    • class com.developmentontheedge.print.PrintAction
    • class com.developmentontheedge.print.PrintPreviewAction
    • class com.developmentontheedge.print.PrintSetupAction
    • class ru.biosoft.gui.RedoAction
    • class biouml.workbench.RemoveDataElementAction
    • class biouml.workbench.module.RemoveModuleAction
    • class biouml.plugins.simulation.RepositoryActionsProvider.ShowPlotAction
    • class biouml.workbench.diagram.SaveAsDiagramAction
    • class biouml.workbench.diagram.SaveDiagramAction
    • class com.developmentontheedge.application.action.SeparatorAction
    • class com.developmentontheedge.application.action.TogglePanelAction
    • class ru.biosoft.gui.UndoAction
    • class biouml.workbench.diagram.ZoomInAction
    • class biouml.workbench.diagram.ZoomOutAction
  • class com.developmentontheedge.jobcontrol.AbstractJobControl (implements com.developmentontheedge.jobcontrol.JobControl)
    • class com.developmentontheedge.jobcontrol.ClassJobControl
    • class com.developmentontheedge.jobcontrol.FunctionJobControl
      • class biouml.plugins.simulation.SimulatorJobControl
  • class javax.swing.AbstractListModel (implements javax.swing.ListModel, java.io.Serializable)
    • class ru.biosoft.access.support.NameListToListModelAdapter (implements ru.biosoft.access.DataCollectionListener)
      • class ru.biosoft.access.support.NameListToComboBoxModelAdapter (implements javax.swing.ComboBoxModel, javax.swing.MutableComboBoxModel)
  • class java.util.AbstractMap (implements java.util.Map)
    • class ru.biosoft.access.BTreeIndex (implements ru.biosoft.access.Index)
      • class ru.biosoft.access.BTreeRangeIndex
    • class java.util.HashMap (implements java.lang.Cloneable, java.util.Map, java.io.Serializable)
      • class ru.biosoft.util.HashMapSoftValues
      • class ru.biosoft.util.HashMapWeakValues
      • class ru.biosoft.access.MemIndex (implements ru.biosoft.access.Index)
      • class biouml.standard.type.access.TitleSqlIndex (implements javax.swing.ComboBoxModel, ru.biosoft.access.DataCollectionListener, ru.biosoft.access.Index, javax.swing.ListModel)
  • class ru.biosoft.math.model.AbstractParser (implements ru.biosoft.math.model.Parser)
    • class ru.biosoft.math.xml.MathMLParser (implements ru.biosoft.math.parser.ParserTreeConstants)
    • class ru.biosoft.math.parser.Parser (implements ru.biosoft.math.parser.ParserConstants, ru.biosoft.math.parser.ParserTreeConstants)
  • class com.beanexplorer.swing.table.AbstractRowModel (implements com.beanexplorer.swing.table.RowModel)
    • class ru.biosoft.access.support.DataCollectionRowModelAdapter (implements ru.biosoft.access.DataCollectionListener)
  • class ru.biosoft.access.AbstractTransformer (implements ru.biosoft.access.Transformer)
    • class biouml.plugins.cellml.CellMLDiagramTransformer
    • class ru.biosoft.access.support.DatabaseEntryTransformer
    • class biouml.model.util.DiagramXmlTransformer
    • class biouml.plugins.ginsim.GinSimTransformer
    • class biouml.plugins.gxl.GxlTransformer
    • class biouml.plugins.sbml.SbmlDiagramTransformer
    • class ru.biosoft.access.support.TagEntryTransformer
      • class ru.biosoft.access.support.BeanInfoEntryTransformer
        • class biouml.plugins.simulation.plot.access.PlotTransformer
        • class biouml.standard.type.access.ReactionTransformer
        • class biouml.plugins.simulation.access.SimulationResultTransformer
    • class ru.biosoft.access.XMLTransformer
  • class javax.swing.undo.AbstractUndoableEdit (implements java.io.Serializable, javax.swing.undo.UndoableEdit)
    • class ru.biosoft.access.DataCollectionRemoveUndo
      • class ru.biosoft.access.DataCollectionAddUndo
  • class com.developmentontheedge.application.action.ActionInitializer
  • class com.developmentontheedge.application.action.ActionManager
  • class org.apache.log4j.AppenderSkeleton (implements org.apache.log4j.Appender, org.apache.log4j.spi.OptionHandler)
    • class com.developmentontheedge.log.TextPaneAppender
  • class com.developmentontheedge.application.Application
  • class com.developmentontheedge.application.ApplicationUtils
  • class ru.biosoft.util.ApplicationUtils
  • class ru.biosoft.access.search.ArrayPropertyValueFilterBeanInfo.FilterPropertyEditor (implements com.beanexplorer.editors.PropertyEditorEx)
  • class ru.biosoft.graphics.ArrowView.Tip
  • class biouml.workbench.BioUMLLauncher (implements org.eclipse.core.boot.IPlatformRunnable)
  • class ru.biosoft.graphics.editor.BoxSelector (implements ru.biosoft.graphics.editor.ViewSelector)
    • class ru.biosoft.graphics.editor.ResizingBoxSelector
  • class biouml.plugins.simulation.ode.Btableau
  • class biouml.plugins.simulation.ode.BthDopr (implements biouml.plugins.simulation.ode.Btheta)
  • class ru.biosoft.access.BTreeIndex.Block
  • class ru.biosoft.access.BTreeIndex.IntKey (implements ru.biosoft.access.Key)
  • class ru.biosoft.access.BTreeIndex.NodeKey (implements java.util.Map.Entry)
  • class biouml.plugins.cellml.CellMLImporter (implements biouml.model.DiagramImporter)
  • class biouml.plugins.cellml.CellMLSupport (implements biouml.plugins.cellml.CellMLConstants)
    • class biouml.plugins.cellml.CellMLModelReader
    • class biouml.plugins.cellml.CellMLModelWriter
  • class java.lang.ClassLoader
    • class java.security.SecureClassLoader
      • class java.net.URLClassLoader
        • class ru.biosoft.access.CollectionFactory.CollectionClassLoader
  • class ru.biosoft.access.CollectionFactory
  • class java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • class java.awt.Container
      • class javax.swing.JComponent (implements java.io.Serializable)
        • class javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
          • class javax.swing.JMenuItem (implements javax.accessibility.Accessible, javax.swing.MenuElement)
            • class javax.swing.JMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
              • class com.developmentontheedge.application.ApplicationMenu
        • class ru.biosoft.graphics.font.FontChooser
        • class javax.swing.JComboBox (implements javax.accessibility.Accessible, java.awt.event.ActionListener, java.awt.ItemSelectable, javax.swing.event.ListDataListener)
          • class com.beanexplorer.editors.ColorComboBox
            • class biouml.standard.filter.ActionEditor.ActionComboBox
        • class javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • class biouml.standard.filter.ActionEditor.ActionRenderer
        • class javax.swing.JMenuBar (implements javax.accessibility.Accessible, javax.swing.MenuElement)
          • class com.developmentontheedge.application.ApplicationMenuBar
        • class javax.swing.JPanel (implements javax.accessibility.Accessible)
          • class ru.biosoft.access.support.AbstractExportDialog.MPanel
          • class ru.biosoft.access.support.AbstractImportDialog.MPanel
          • class com.developmentontheedge.application.ApplicationStatusBar (implements java.awt.event.ActionListener, com.developmentontheedge.jobcontrol.JobControlListener)
          • class ru.biosoft.access.support.DataCollectionMultyChoicePane
          • class biouml.standard.diagram.DiagramElementSelector
          • class biouml.workbench.diagram.DiagramsPane (implements javax.swing.event.ChangeListener)
          • class ru.biosoft.gui.DocumentPane (implements javax.swing.event.ChangeListener)
          • class com.beanexplorer.web.HtmlPane (implements javax.swing.event.HyperlinkListener)
            • class com.beanexplorer.web.HtmlPropertyInspector
              • class ru.biosoft.gui.PropertiesView (implements ru.biosoft.gui.ViewPart)
            • class ru.biosoft.gui.HtmlView (implements ru.biosoft.gui.ViewPart)
              • class biouml.workbench.diagram.LegendView
          • class com.developmentontheedge.jobcontrol.JobControlPane
          • class com.developmentontheedge.log.LogTextPanel
          • class biouml.plugins.matlab.MatlabErrorPane
          • class com.developmentontheedge.application.NamedPanel
          • class com.developmentontheedge.print.PagePreview
          • class com.developmentontheedge.application.PanelManager (implements java.beans.PropertyChangeListener)
            • class ru.biosoft.math.ExpressionEditorPane
            • class ru.biosoft.workbench.WorkbenchPage
          • class biouml.plugins.simulation.plot.PlotEditorPane
          • class biouml.plugins.simulation.plot.PlotPane (implements org.jfree.chart.event.PlotChangeListener, java.beans.PropertyChangeListener, com.beanexplorer.swing.table.RowModelListener)
          • class com.beanexplorer.swing.PropertyInspector (implements com.beanexplorer.swing.b, java.beans.PropertyChangeListener, com.beanexplorer.undo.Transactable)
            • class ru.biosoft.gui.PropertiesEditor (implements ru.biosoft.gui.EditorPart)
          • class biouml.standard.diagram.ReactionPane
          • class ru.biosoft.access.repository.RepositoryPane
          • class biouml.standard.diagram.SemanticRelationPane
            • class biouml.standard.diagram.NoteLinkPane
          • class biouml.plugins.simulation.SimulationPane
          • class com.beanexplorer.swing.TabularPropertyInspector (implements com.beanexplorer.swing.b, com.beanexplorer.undo.Transactable)
            • class ru.biosoft.gui.TabularPropertiesEditor (implements ru.biosoft.gui.EditorPart)
              • class biouml.workbench.diagram.ParametersTabularEditor (implements java.beans.PropertyChangeListener)
                • class biouml.workbench.diagram.VariablesTabularEditor
          • class com.developmentontheedge.application.dialog.TextButtonField
            • class com.developmentontheedge.application.dialog.BrowseTextField
          • class ru.biosoft.graphics.editor.ViewPane (implements java.awt.event.MouseListener, java.awt.event.MouseMotionListener)
            • class ru.biosoft.graphics.editor.ViewEditorPane (implements java.awt.event.KeyListener, com.beanexplorer.undo.Transactable, com.beanexplorer.undo.TransactionListener)
          • class ru.biosoft.graphics.editor.ViewPane.MPanel
          • class ru.biosoft.gui.ViewPartSupport (implements ru.biosoft.gui.ViewPart)
            • class biouml.workbench.diagram.ClipboardView (implements javax.swing.event.ListSelectionListener, ru.biosoft.graphics.editor.ViewPaneListener)
            • class ru.biosoft.gui.EditorPartSupport (implements ru.biosoft.gui.EditorPart)
              • class ru.biosoft.gui.EditorsTabbedPane
                • class ru.biosoft.gui.ExplorerPane
                • class ru.biosoft.gui.PluggedEditorsTabbedPane
              • class ru.biosoft.gui.HtmlEditor
                • class biouml.workbench.diagram.DiagramDescriptionEditor
              • class ru.biosoft.plugins.javascript.JScriptConsole
              • class biouml.plugins.simulation.SimulationEnginePane
                • class biouml.plugins.simulation.java.JavaEngineControl
                • class biouml.plugins.matlab.MatlabEngineControl
            • class biouml.workbench.diagram.FilterView
            • class ru.biosoft.gui.LogPane
          • class ru.biosoft.gui.wizard.WizardPanel (implements ru.biosoft.gui.wizard.Wizard)
        • class javax.swing.JPopupMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
          • class com.developmentontheedge.application.ApplicationPopupMenu
        • class javax.swing.JProgressBar (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • class com.developmentontheedge.jobcontrol.JobProgressBar (implements com.developmentontheedge.jobcontrol.JobControlListener)
        • class javax.swing.JTabbedPane (implements javax.accessibility.Accessible, java.io.Serializable, javax.swing.SwingConstants)
          • class ru.biosoft.workbench.PageManager
        • class javax.swing.text.JTextComponent (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • class javax.swing.JTextArea
            • class ru.biosoft.plugins.javascript.EvalTextArea (implements javax.swing.event.DocumentListener, java.awt.event.KeyListener)
        • class javax.swing.JToolBar (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • class com.developmentontheedge.application.ApplicationToolBar
      • class java.awt.Window (implements javax.accessibility.Accessible)
        • class java.awt.Dialog
          • class javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • class ru.biosoft.workbench.AboutDialog
            • class ru.biosoft.access.CreateDataCollectionDefaultController (implements ru.biosoft.access.CreateDataCollectionController)
              • class ru.biosoft.access.support.AbstractImportDialog.ImportController
            • class com.developmentontheedge.application.dialog.OkCancelDialog
              • class ru.biosoft.access.support.AbstractExportDialog
              • class ru.biosoft.access.support.AbstractImportDialog
              • class biouml.workbench.AskIDDialog
              • class biouml.plugins.sbml.CreateDiagramElementDialog
              • class biouml.standard.diagram.CreateDiagramElementDialog
              • class biouml.standard.diagram.CreateEdgeDialog
              • class biouml.standard.diagram.CreateReactionDialog
              • class ru.biosoft.math.ExpressionEditorDialog
              • class biouml.model.htmlgen.GenerateHTMLDialog
              • class biouml.plugins.matlab.MatlabErrorDialog
              • class biouml.workbench.module.ModuleExportDialog
              • class biouml.workbench.module.ModuleInfoDialog
              • class biouml.workbench.module.ModuleReplaceDialog
              • class biouml.workbench.module.ModulesActivatingDialog
              • class biouml.workbench.diagram.NewDiagramDialog
              • class biouml.workbench.module.NewModuleDialog
              • class biouml.plugins.simulation.plot.PlotDialog
              • class biouml.workbench.diagram.ProcessDiagramDialog
                • class biouml.workbench.diagram.ConvertDiagramDialog
                • class biouml.workbench.diagram.ExportDiagramDialog
                • class biouml.workbench.diagram.ImportDiagramDialog
              • class biouml.workbench.module.StatusInfoDialog (implements com.developmentontheedge.jobcontrol.JobControlListener)
            • class ru.biosoft.util.OkCancelDialog
              • class ru.biosoft.access.support.DataCollectionMultyChoiceDialog
              • class ru.biosoft.access.support.NewDataElementDialog
            • class biouml.workbench.PreferencesDialog
            • class com.developmentontheedge.print.PreviewDialog
            • class ru.biosoft.gui.wizard.WizardDialog (implements ru.biosoft.gui.wizard.Wizard)
        • class java.awt.Frame (implements java.awt.MenuContainer)
          • class javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • class com.developmentontheedge.application.ApplicationFrame
              • class biouml.workbench.BioUMLApplication (implements javax.swing.event.ChangeListener)
              • class ru.biosoft.workbench.WorkbenchWindow
            • class ru.biosoft.access.search.DataSearch (implements java.beans.PropertyChangeListener)
            • class ru.biosoft.gui.wizard.WizardFrame (implements ru.biosoft.gui.wizard.Wizard)
  • class biouml.standard.filter.CompositeHighlightAction (implements biouml.standard.filter.Action)
  • class com.developmentontheedge.jobcontrol.CurrentJobControl
  • class biouml.model.dynamics.DAEModelUtilities
  • class biouml.model.dynamics.DAEModelUtilities.EquationASTPair
  • class ru.biosoft.access.DataCollectionInfo
  • class ru.biosoft.access.DataCollectionListenerSupport (implements ru.biosoft.access.DataCollectionListener)
  • class ru.biosoft.access.repository.DataCollectionTreeModelAdapter (implements ru.biosoft.access.DataCollectionListener, javax.swing.tree.TreeModel)
  • class ru.biosoft.access.DataCollectionUndoListener (implements ru.biosoft.access.DataCollectionListener, java.beans.PropertyChangeListener)
  • class ru.biosoft.access.DataElementSupport (implements ru.biosoft.access.DataElement)
    • class ru.biosoft.access.AbstractDataCollection (implements ru.biosoft.access.DataCollection)
      • class ru.biosoft.access.DataCollectionUnion (implements ru.biosoft.access.CollectionUnion)
      • class ru.biosoft.access.DerivedDataCollection
        • class ru.biosoft.access.FilteredDataCollection (implements ru.biosoft.access.DataCollectionListener)
        • class biouml.model.Module
        • class ru.biosoft.access.TransformedDataCollection (implements ru.biosoft.access.DataCollectionListener)
        • class biouml.model.dynamics.VariablesDataCollection
      • class ru.biosoft.access.EntryCollection
        • class ru.biosoft.access.FileEntryCollection
        • class ru.biosoft.access.FileEntryCollection2
      • class ru.biosoft.access.SqlDataCollection
      • class ru.biosoft.access.VectorDataCollection
        • class ru.biosoft.access.DataCollectionUnion2 (implements ru.biosoft.access.CollectionUnion, ru.biosoft.access.DataCollectionListener)
        • class ru.biosoft.access.FileCollection
        • class ru.biosoft.plugins.javascript.HostObjectInfo
          • class ru.biosoft.plugins.javascript.ClassInfo
        • class ru.biosoft.access.LocalRepository (implements ru.biosoft.access.Repository)
        • class ru.biosoft.plugins.Plugins
        • class biouml.plugins.sbw.SbwModule
        • class biouml.plugins.sbw.SbwService
        • class biouml.plugins.sbw.SbwServiceCategory
      • class ru.biosoft.plugins.VisiblePlugin
        • class ru.biosoft.plugins.javascript.JScriptVisiblePlugin
        • class biouml.plugins.sbw.SbwVisiblePlugin
    • class biouml.plugins.cellml.CellMLModuleType (implements biouml.model.ModuleType)
    • class ru.biosoft.access.DataElementRef
    • class ru.biosoft.access.Entry
    • class ru.biosoft.access.FileDataElement
    • class ru.biosoft.plugins.javascript.FunctionInfo
    • class ru.biosoft.plugins.javascript.PropertyInfo
    • class biouml.plugins.sbml.SbmlModuleType (implements biouml.model.ModuleType)
    • class biouml.plugins.simulation.SimulationResult
    • class biouml.standard.StandardModuleType (implements biouml.model.ModuleType)
      • class biouml.standard.SqlModuleType
  • class biouml.model.DefaultDiagramViewBuilder (implements biouml.model.DiagramViewBuilder)
    • class biouml.model.dynamics.EModelDiagramViewBuilder
    • class biouml.plugins.ginsim.GinSimDiagramViewBuilder
    • class biouml.standard.diagram.PathwayDiagramViewBuilder
      • class biouml.standard.diagram.GeneNetworkDiagramType.GeneNetworkDiagramViewBuilder
      • class biouml.standard.diagram.MetabolicPathwayDiagramType.MetabolicPathwayDiagramViewBuilder
      • class biouml.standard.diagram.PathwaySimulationDiagramViewBuilder
        • class biouml.plugins.cellml.CellMLDiagramViewBuilder
        • class biouml.plugins.sbml.SbmlDiagramViewBuilder
      • class biouml.standard.diagram.SemanticNetworkDiagramType.SemanticNetworkDiagramViewBuilder
  • class org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • class biouml.plugins.gxl.GxlReader.GxlHandler (implements biouml.plugins.gxl.GxlConstants)
      • class biouml.plugins.ginsim.GinSimReader.GinSimHandler (implements biouml.plugins.ginsim.GinSimConstants)
  • class ru.biosoft.math.model.DefaultParserContext (implements ru.biosoft.math.model.ParserContext)
  • class ru.biosoft.access.DefaultQuerySystem (implements ru.biosoft.access.QuerySystem)
  • class biouml.model.DefaultSemanticController (implements biouml.model.SemanticController)
    • class biouml.standard.diagram.PathwaySemanticController
      • class biouml.standard.diagram.PathwaySimulationSemanticController
        • class biouml.plugins.cellml.CellMLSemanticController
        • class biouml.plugins.sbml.SbmlSemanticController
  • class biouml.plugins.sbml._test.DefaultTestLogger (implements biouml.plugins.sbml._test.TestLogger)
    • class biouml.plugins.sbml._test.HtmlStatisticsLogger
  • class ru.biosoft.graphics.editor.DefaultViewEditorHelper (implements ru.biosoft.graphics.editor.ViewEditorHelper)
  • class biouml.workbench.diagram.DiagramEditorHelper (implements com.beanexplorer.undo.TransactionListener, ru.biosoft.graphics.editor.ViewEditorHelper)
  • class biouml.workbench.diagram.DiagramElementInfo
  • class biouml.workbench.diagram.DiagramExporterRegistry
  • class biouml.workbench.diagram.DiagramExporterRegistry.ExporterInfo
  • class biouml.workbench.diagram.DiagramFactory (implements com.developmentontheedge.application.DocumentFactory)
  • class biouml.workbench.diagram.DiagramImageWriter (implements biouml.model.DiagramExporter)
  • class biouml.workbench.diagram.DiagramImporterRegistry
  • class biouml.workbench.diagram.DiagramImporterRegistry.ImporterInfo
  • class biouml.standard.type.access.DiagramSqlTransformer.SqlReferenceGenerator (implements biouml.model.util.ImageGenerator.ReferenceGenerator)
  • class biouml.plugins.jgraph.DiagramToJGraphTransformer
  • class biouml.model.DiagramTypeConverter.NoConverter (implements biouml.model.DiagramTypeConverter)
  • class biouml.model.DiagramTypeConverter.YesConverter (implements biouml.model.DiagramTypeConverter)
    • class biouml.model.DiagramTypeConverter.ConditionalConverter
  • class biouml.workbench.diagram.DiagramTypeConverterRegistry
  • class biouml.workbench.diagram.DiagramTypeConverterRegistry.Conversion
  • class biouml.model.DiagramTypeSupport (implements biouml.model.DiagramType)
    • class biouml.plugins.cellml.CellMLDiagramType
    • class biouml.model.dynamics.EModelDiagramType
    • class biouml.plugins.ginsim.GinSimDiagramType
    • class biouml.standard.diagram.PathwayDiagramType
      • class biouml.standard.diagram.GeneNetworkDiagramType
      • class biouml.standard.diagram.MetabolicPathwayDiagramType
      • class biouml.standard.diagram.PathwaySimulationDiagramType
      • class biouml.standard.diagram.SemanticNetworkDiagramType
    • class biouml.plugins.sbml.SbmlDiagramType
      • class biouml.plugins.sbml.SbmlDiagramType_L1
      • class biouml.plugins.sbml.SbmlDiagramType_L2
  • class biouml.model.util.DiagramXmlConstants
    • class biouml.model.util.DiagramXmlSupport
      • class biouml.model.util.DiagramXmlReader
      • class biouml.model.util.DiagramXmlWriter
  • class java.util.Dictionary
    • class java.util.Hashtable (implements java.lang.Cloneable, java.util.Map, java.io.Serializable)
      • class ru.biosoft.access.IndexTable
      • class java.util.Properties
        • class ru.biosoft.util.ExProperties
        • class com.developmentontheedge.application.MapRegistry (implements com.developmentontheedge.application.ApplicationRegistry)
  • class ru.biosoft.gui.Document (implements com.developmentontheedge.application.ApplicationDocument)
    • class biouml.workbench.diagram.DiagramDocument (implements java.beans.PropertyChangeListener)
    • class ru.biosoft.gui.RepositoryDocument (implements java.beans.PropertyChangeListener, ru.biosoft.access.repository.RepositoryListener)
  • class com.developmentontheedge.application.DocumentManager
    • class ru.biosoft.gui.DocumentManager
  • class biouml.plugins.cellml.DomElementTransformer
  • class biouml.plugins.cellml.DomHelperSupport (implements biouml.plugins.cellml.DomHelper)
    • class biouml.plugins.cellml.RdfHelper
  • class biouml.plugins.simulation.ode.DormandPrince (implements biouml.plugins.simulation.Simulator)
  • class biouml.plugins.simulation.ode.DormandPrince.Options
  • class com.beanexplorer.beans.DynamicProperty
    • class ru.biosoft.access.support.DatabaseField
      • class ru.biosoft.access.support.StringField
  • class com.beanexplorer.beans.DynamicPropertySetSupport (implements com.beanexplorer.beans.DynamicPropertySet)
    • class ru.biosoft.access.support.DatabaseEntry (implements ru.biosoft.access.MutableDataElement)
  • class biouml.standard.type.EditionHistory (implements java.beans.PropertyChangeListener)
  • class biouml.standard.type.EditionHistory.Edition
  • class ru.biosoft.gui.EditorsManager (implements ru.biosoft.gui.ViewPart)
  • class ru.biosoft.gui.EditorsManager.EditorInfo
  • class biouml.model.dynamics.EModel.VariableFilter (implements ru.biosoft.access.Filter)
  • class biouml.model.dynamics.EModelDiagramViewOptions
  • class ru.biosoft.access.support.EntryParser
  • class biouml.plugins.simulation.ode.ErrorEstimator
  • class biouml.plugins.simulation.hybrid.Event
    • class biouml.plugins.simulation.hybrid.Transition
  • class biouml.plugins.simulation.java.EventLoopSimulator (implements biouml.plugins.simulation.Simulator)
  • class java.util.EventObject (implements java.io.Serializable)
    • class java.awt.AWTEvent
      • class java.awt.event.ComponentEvent
        • class java.awt.event.InputEvent
          • class java.awt.event.MouseEvent
            • class ru.biosoft.graphics.editor.ViewPaneEvent
    • class ru.biosoft.access.DataCollectionEvent
  • class ru.biosoft.util.FileBuffer
    • class ru.biosoft.util.ConservativeFastFileBuffer
    • class ru.biosoft.util.FastFileBuffer
    • class ru.biosoft.util.SoftFileBuffer
  • class ru.biosoft.util.FileChooserRegistry
  • class javax.swing.filechooser.FileFilter
    • class biouml.workbench.module.BMDFileFilter
    • class biouml.model.htmlgen.XSLFileFilter
  • class ru.biosoft.access.Filter.IncludeAllFilter (implements ru.biosoft.access.Filter)
  • class ru.biosoft.access.Filter.IncludeNoneFilter (implements ru.biosoft.access.Filter)
  • class ru.biosoft.access.search.FilteringSettings
  • class java.awt.event.FocusAdapter (implements java.awt.event.FocusListener)
    • class ru.biosoft.gui.HtmlEditor.DocumentFocusListener
  • class ru.biosoft.math.view.FormulaViewBuilder
  • class biouml.model.util.Framework
  • class ru.biosoft.plugins.javascript.FunctionInfo.Argument
  • class ru.biosoft.plugins.javascript.FunctionInfo.Example
  • class ru.biosoft.plugins.javascript.FunctionInfo.Exception
  • class ru.biosoft.plugins.javascript.FunctionInfo.ReturnedValue
  • class biouml.plugins.ginsim.GinMLExporter (implements biouml.model.DiagramExporter)
  • class biouml.plugins.ginsim.GinMLImporter (implements biouml.model.DiagramImporter)
  • class ru.biosoft.graphics.GraphicProperties
  • class biouml.plugins.gxl.GxlExporter (implements biouml.model.DiagramExporter)
  • class biouml.plugins.gxl.GxlParserContext
    • class biouml.plugins.ginsim.GinSimParserContext
  • class biouml.plugins.gxl.GxlSupport (implements biouml.plugins.gxl.GxlConstants)
    • class biouml.plugins.gxl.GxlReader
      • class biouml.plugins.ginsim.GinSimReader
    • class biouml.plugins.gxl.GxlWriter
      • class biouml.plugins.ginsim.GinSimWriter
  • class ru.biosoft.workbench.HelpRegistry
  • class biouml.standard.filter.HideAction (implements biouml.standard.filter.Action)
  • class biouml.standard.filter.HighlightAction (implements biouml.standard.filter.Action)
  • class ru.biosoft.access.support.IdGenerator
  • class biouml.model.util.ImageGenerator
  • class ru.biosoft.access.Index.IndexEntry
    • class ru.biosoft.access.Index.StringIndexEntry
  • class biouml.plugins.simulation.ode.Initsss
  • class ru.biosoft.graphics.editor.InverseSelector (implements ru.biosoft.graphics.editor.ViewSelector)
  • class biouml.plugins.simulation.java.JavaBaseModel (implements biouml.plugins.simulation.ae.AeModel, biouml.plugins.simulation.ode.OdeModel)
  • class biouml.plugins.simulation.java.JavaError
  • class biouml.plugins.matlab.JMatLinkFactory
  • class biouml.plugins.matlab.JMatLinkJDK14 (implements biouml.plugins.matlab.JMatLinkInterface)
  • class com.developmentontheedge.jobcontrol.JobControlEvent
  • class com.developmentontheedge.jobcontrol.JobControlListenerAdapter (implements com.developmentontheedge.jobcontrol.JobControlListener)
  • class ru.biosoft.plugins.javascript.JScriptContext
  • class ru.biosoft.plugins.javascript.JScriptHelp
  • class ru.biosoft.plugins.javascript.JScriptRunner (implements org.eclipse.core.boot.IPlatformRunnable)
  • class ru.biosoft.plugins.javascript.JScriptShell (implements org.eclipse.core.boot.IPlatformRunnable)
  • class ru.biosoft.util.KeyValuePair
  • class biouml.standard.type.KineticType.Element (implements ru.biosoft.access.support.SerializableAsText)
  • class com.developmentontheedge.print.LargePageable (implements java.awt.print.Pageable)
    • class com.developmentontheedge.print.JPrintableComponent (implements java.awt.print.Printable)
  • class com.developmentontheedge.print.LargePageable.TranslatedPrintable (implements java.awt.print.Printable)
  • class ru.biosoft.math.model.LinearFormatter (implements ru.biosoft.math.model.Formatter)
    • class ru.biosoft.math.model.PiecewiseExtFormatter
      • class ru.biosoft.math.model.JavaFormatter
      • class ru.biosoft.math.model.MatlabFormatter
  • class ru.biosoft.math.xml.MathMLFormatter (implements ru.biosoft.math.model.Formatter)
  • class ru.biosoft.math.xml.MathMLParser.CSymbol
  • class ru.biosoft.math.MathRoutines
  • class biouml.plugins.matlab.MatlabError
  • class biouml.model.util.ModulePackager
  • class biouml.plugins.simulation.ae.NewtonSolver
  • class biouml.model.NodeInfo
  • class biouml.plugins.simulation.ode.ODEFileWriter
  • class biouml.plugins.simulation.ode.OdeSimulator (implements biouml.plugins.simulation.Simulator)
  • class com.beanexplorer.beans.Option
    • class biouml.model.AbstractFilter (implements biouml.model.DiagramFilter)
      • class biouml.standard.filter.BiopolimerDiagramFilter
    • class biouml.model.dynamics.Assignment (implements biouml.model.dynamics.ExpressionOwner)
    • class ru.biosoft.graphics.Brush
    • class ru.biosoft.graphics.font.ColorFont
    • class biouml.standard.type.DatabaseReference (implements ru.biosoft.access.support.SerializableAsText)
    • class biouml.model.DiagramViewOptions
      • class biouml.standard.diagram.PathwayDiagramViewOptions
        • class biouml.standard.diagram.GeneNetworkDiagramType.GeneNetworkDiagramViewOptions
        • class biouml.standard.diagram.MetabolicPathwayDiagramType.MetabolicPathwayDiagramViewOptions
        • class biouml.standard.diagram.PathwaySimulationDiagramViewOptions
        • class biouml.standard.diagram.SemanticNetworkDiagramType.SemanticNetworkDiagramViewOptions
    • class biouml.model.dynamics.EModelRoleSupport (implements biouml.model.dynamics.EModelRole)
      • class biouml.model.dynamics.EModel (implements ru.biosoft.access.DataCollectionListener, ru.biosoft.math.model.ParserContext, java.beans.PropertyChangeListener)
      • class biouml.model.dynamics.Equation (implements biouml.model.dynamics.ExpressionOwner)
      • class biouml.model.dynamics.Event (implements biouml.model.dynamics.ExpressionOwner)
      • class biouml.model.dynamics.Function (implements biouml.model.dynamics.ExpressionOwner)
      • class biouml.model.dynamics.State (implements biouml.model.dynamics.ExpressionOwner)
      • class biouml.model.dynamics.Transition (implements biouml.model.dynamics.ExpressionOwner)
    • class ru.biosoft.math.Expression
    • class biouml.standard.type.ImageDescriptor (implements java.awt.image.ImageObserver)
    • class biouml.standard.type.KineticLaw
    • class ru.biosoft.access.MutableDataElementSupport (implements ru.biosoft.access.MutableDataElement)
      • class biouml.standard.type.BaseSupport (implements biouml.standard.type.Base)
        • class biouml.standard.type.GenericEntity
          • class biouml.standard.type.Referrer
            • class biouml.standard.type.Concept
              • class biouml.standard.type.Compartment
                • class biouml.standard.type.Cell
              • class biouml.standard.type.DiagramReference
              • class biouml.standard.type.Function
              • class biouml.standard.type.Molecule
                • class biouml.standard.type.Biopolymer
                  • class biouml.standard.type.Gene
                  • class biouml.standard.type.Protein
                  • class biouml.standard.type.RNA
                • class biouml.standard.type.Substance
              • class biouml.standard.type.Process
              • class biouml.standard.type.State
            • class biouml.standard.type.Constant
            • class biouml.standard.type.DatabaseInfo
            • class biouml.standard.type.DiagramInfo
              • class biouml.plugins.cellml.DiagramInfo
            • class biouml.standard.type.Reaction (implements ru.biosoft.access.DataCollection, biouml.model.dynamics.FormulaDelegate)
              • class biouml.plugins.cellml.Reaction
            • class biouml.standard.type.SemanticRelation (implements biouml.standard.type.Relation)
          • class biouml.standard.type.SpecieReference (implements biouml.model.dynamics.FormulaDelegate, biouml.standard.type.Relation, ru.biosoft.access.support.SerializableAsText)
        • class biouml.plugins.ginsim.GinSimEdgeKernel
        • class biouml.plugins.ginsim.GinSimNodeKernel
        • class biouml.plugins.sbml.Specie
        • class biouml.plugins.cellml.Species
        • class biouml.standard.type.Stub
          • class biouml.standard.type.Stub.Note
          • class biouml.standard.type.Stub.NoteLink
      • class biouml.model.DiagramElement
        • class biouml.model.Edge
        • class biouml.model.Node
          • class biouml.model.Compartment (implements ru.biosoft.access.DataCollection)
            • class biouml.model.Diagram (implements java.beans.PropertyChangeListener)
            • class biouml.model.EquivalentNodeGroup
      • class biouml.standard.type.KineticType
      • class biouml.standard.type.LiteratureReference
      • class biouml.plugins.simulation.plot.Plot
      • class biouml.standard.type.RelationType
      • class biouml.standard.type.Species
      • class biouml.standard.type.Unit
      • class biouml.model.dynamics.Variable
        • class biouml.model.dynamics.VariableRole (implements biouml.model.dynamics.EModelRole)
    • class ru.biosoft.access.MutableFilter (implements ru.biosoft.access.Filter)
      • class ru.biosoft.access.search.ArrayPropertyValueFilter
      • class ru.biosoft.access.CompositeFilter
        • class ru.biosoft.access.search.BeanValueFilter
      • class ru.biosoft.access.PatternFilter
      • class ru.biosoft.access.search.PropertyValueFilter
    • class ru.biosoft.graphics.Pen
    • class biouml.plugins.simulation.plot.PlotEx
    • class ru.biosoft.graphics.RulerOptions
    • class biouml.plugins.simulation.plot.Series
    • class biouml.plugins.simulation.SimulationEngine
      • class biouml.plugins.simulation.java.JavaSimulationEngine
      • class biouml.plugins.matlab.MatlabSimulationEngine
    • class biouml.standard.filter.ValueAction
    • class biouml.standard.filter.ValueActionFilter (implements biouml.standard.filter.ActionFilter)
      • class biouml.standard.filter.BiopolimerDiagramFilter.CellTypeFilter
      • class biouml.standard.filter.BiopolimerDiagramFilter.InducerFilter
      • class biouml.standard.filter.BiopolimerDiagramFilter.SpeciesFilter
  • class java.io.OutputStream
    • class java.io.ByteArrayOutputStream
      • class biouml.plugins.simulation.java.RunTimeCompiler.ErrorOutputStream
  • class java.awt.print.PageFormat (implements java.lang.Cloneable)
    • class com.developmentontheedge.print.FooterFormat
  • class com.developmentontheedge.application.PanelInfo
  • class ru.biosoft.math.parser.ParserTokenManager (implements ru.biosoft.math.parser.ParserConstants)
  • class biouml.standard.diagram.PathwayDiagramViewOptions.RelationTypeColor
  • class biouml.standard.diagram.PathwayDiagramViewOptions.RelationTypeStroke
  • class ru.biosoft.workbench.PerspectiveDescriptor
  • class ru.biosoft.workbench.PerspectiveDescriptor.View
  • class ru.biosoft.workbench.PerspectiveRegistry
  • class org.eclipse.core.runtime.Plugin (implements org.osgi.framework.BundleActivator)
    • class biouml.workbench.BioUMLPlugin
  • class ru.biosoft.access.repository.PluginActions (implements ru.biosoft.access.repository.ActionsProvider)
  • class ru.biosoft.math.model.PredefinedFunction (implements ru.biosoft.math.model.Function)
  • class biouml.workbench.Preferences (implements com.developmentontheedge.application.ApplicationRegistry, java.lang.Cloneable)
  • class com.developmentontheedge.print.PrintManager
  • class java.beans.PropertyEditorSupport (implements java.beans.PropertyEditor)
    • class com.beanexplorer.editors.CustomEditorSupport (implements java.awt.event.ActionListener, com.beanexplorer.editors.PropertyEditorEx)
      • class biouml.standard.filter.ActionEditor
      • class com.beanexplorer.editors.ColorEditor
        • class ru.biosoft.graphics.BrushEditor
      • class ru.biosoft.access.support.DataCollectionMultyChoicePropertyEditor
        • class biouml.standard.type.ReferrerBeanInfo.LiteratureReferencesEditor
      • class ru.biosoft.graphics.font.FontEditor
    • class biouml.standard.type.MultiLineHtmlFieldEditor
    • class com.beanexplorer.editors.StringTagEditorSupport
      • class biouml.standard.type.ConceptBeanInfo.ConceptTypeEditor
      • class ru.biosoft.access.search.FilteringSettingsBeanInfo.ModuleEditor
      • class biouml.standard.type.KineticType.ElementBeanInfo.RoleEditor
      • class biouml.plugins.simulation.plot.PlotExBeanInfo.PlotNameEditor (implements com.beanexplorer.editors.PropertyEditorEx)
      • class biouml.standard.type.ProteinBeanInfo.FunctionalStateEditor
      • class biouml.standard.type.ProteinBeanInfo.ModificationEditor
      • class biouml.standard.type.ProteinBeanInfo.StructureEditor
      • class biouml.standard.type.RNABeanInfo.RnaTypeEditor
      • class biouml.standard.type.SemanticRelationBeanInfo.ParticipationTypeEditor
      • class biouml.plugins.sbml.SpecieBeanInfo.SpecieTypeEditor
      • class biouml.standard.type.SpecieReferenceBeanInfo.ModifierActionEditor
      • class biouml.standard.type.SpecieReferenceBeanInfo.SpecieReferenceEditor
    • class com.beanexplorer.editors.TagEditorSupport
      • class biouml.model.CompartmentBeanInfo.ShapeTypeEditor
      • class biouml.model.DiagramFilterActionEditor
      • class ru.biosoft.access.search.FilteringSettingsBeanInfo.TypeEditor (implements com.beanexplorer.editors.PropertyEditorEx)
      • class biouml.plugins.sbw.ModuleDescriptorBeanInfo.ManagementTypeEditor
      • class biouml.model.QueryOptionsBeanInfo.DirectionTypeEditor
  • class ru.biosoft.access.search.PropertyValueFilterBeanInfo.FilterPropertyEditor (implements com.beanexplorer.editors.PropertyEditorEx)
  • class biouml.model.QueryEngineSupport (implements biouml.model.QueryEngine)
    • class biouml.standard.PathwayQueryEngine
    • class biouml.standard.StandardQueryEngine
  • class biouml.model.QueryOptions
    • class biouml.standard.PathwayQueryOptions
  • class java.lang.ref.Reference
    • class java.lang.ref.SoftReference
      • class ru.biosoft.util.HashMapSoftValues.SoftValueRef
    • class java.lang.ref.WeakReference
      • class ru.biosoft.util.HashMapWeakValues.WeakValueRef
  • class ru.biosoft.workbench.RegistryReader
    • class ru.biosoft.workbench.PerspectiveRegistry.PerspectiveExtensionRegistryReader
    • class ru.biosoft.workbench.PerspectiveRegistry.PerspectiveRegistryReader
    • class ru.biosoft.workbench.ViewRegistry.ViewRegistryReader
  • class javax.swing.RepaintManager
    • class ru.biosoft.gui.RepaintManager
  • class biouml.plugins.simulation.RepositoryActionsProvider (implements ru.biosoft.access.repository.ActionsProvider)
  • class biouml.workbench.RepositoryActionsProvider (implements ru.biosoft.access.repository.ActionsProvider)
  • class ru.biosoft.access.search.RepositoryActionsProvider (implements ru.biosoft.access.repository.ActionsProvider)
  • class java.util.ResourceBundle
    • class java.util.ListResourceBundle
      • class ru.biosoft.graphics.BrushMessageBundle
      • class ru.biosoft.graphics.font.ColorFontMessageBundle
      • class ru.biosoft.util.KeyValuePairMessageBundle
      • class biouml.model.MessageBundle
      • class biouml.model.dynamics.resources.MessageBundle
      • class biouml.model.util.MessageBundle
      • class biouml.plugins.cellml.MessageBundle
      • class biouml.plugins.ginsim.MessageBundle
      • class biouml.plugins.gxl.MessageBundle
      • class biouml.plugins.matlab.resources.MessageBundle
      • class biouml.plugins.sbml.MessageBundle
      • class biouml.plugins.sbw.MessageBundle
      • class biouml.plugins.simulation.java.MessageBundle
      • class biouml.plugins.simulation.resources.MessageBundle
      • class biouml.standard.MessageBundle
      • class biouml.standard.diagram.MessageBundle
      • class biouml.standard.filter.MessageBundle
      • class biouml.standard.type.MessageBundle
      • class biouml.workbench.resources.MessageBundle
      • class ru.biosoft.access.MessageBundle
      • class ru.biosoft.access.search.MessageBundle
      • class ru.biosoft.access.support.MessageBundle
      • class ru.biosoft.gui.resources.MessageBundle
      • class ru.biosoft.plugins.javascript.MessageBundle
      • class ru.biosoft.workbench.MessageBundle
      • class ru.biosoft.graphics.PenMessageBundle
      • class ru.biosoft.graphics.RulerOptionsMessageBundle
  • class biouml.plugins.simulation.ResultWriter (implements biouml.plugins.simulation.ResultListener)
  • class biouml.plugins.simulation.ode.RootFinder
  • class biouml.plugins.simulation.java.RunTimeCompiler
  • class biouml.plugins.sbml.SbmlConstants
    • class biouml.plugins.sbml.SbmlSupport
      • class biouml.plugins.sbml.SbmlModelReader
        • class biouml.plugins.sbml.SbmlModelReader_11
          • class biouml.plugins.sbml.SbmlModelReader_12
        • class biouml.plugins.sbml.SbmlModelReader_21
      • class biouml.plugins.sbml.SbmlModelWriter
        • class biouml.plugins.sbml.SbmlModelWriter_21
        • class biouml.plugins.sbml.SbmlModelWriter_L1
          • class biouml.plugins.sbml.SbmlModelWriter_11
          • class biouml.plugins.sbml.SbmlModelWriter_12
  • class biouml.plugins.sbml.SbmlExporter (implements biouml.model.DiagramExporter)
  • class biouml.plugins.sbml.SbmlImporter (implements biouml.model.DiagramImporter)
  • class biouml.plugins.sbml._test.SbmlJavaConsoleTest
  • class biouml.plugins.sbml._test.SbmlJavaMain
  • class biouml.plugins.sbml._test.SbmlJavaTestConsol
  • class biouml.plugins.sbml._test.SbmlMatlabConsoleTest
  • class biouml.plugins.sbml.SbmlModelFactory
  • class biouml.plugins.sbml._test.SbmlSemanticCSVHander
  • class biouml.plugins.sbml._test.SbmlTestSimulationEngineAdapter
  • class biouml.plugins.sbw.SbwHost
  • class biouml.plugins.sbw.SbwHost.SbmlModel
  • class biouml.plugins.sbw.SbwServiceMethod (implements ru.biosoft.access.DataElement)
  • class org.mozilla.javascript.ScriptableObject (implements org.mozilla.javascript.debug.DebuggableObject, org.mozilla.javascript.Scriptable, java.io.Serializable)
    • class org.mozilla.javascript.ImporterTopLevel
      • class ru.biosoft.plugins.javascript.Global
  • class ru.biosoft.access.support.SetPropertyCommand (implements ru.biosoft.access.support.TagCommand)
    • class ru.biosoft.access.support.SetArrayPropertyCommand
  • class java.beans.SimpleBeanInfo (implements java.beans.BeanInfo)
    • class com.beanexplorer.beans.BeanInfoEx (implements com.beanexplorer.beans.BeanInfoConstants)
      • class ru.biosoft.access.search.ArrayPropertyValueFilterBeanInfo
      • class ru.biosoft.access.search.BeanValueFilterBeanInfo
      • class biouml.standard.filter.BiopolimerDiagramFilterBeanInfo
      • class ru.biosoft.graphics.BrushBeanInfo
      • class ru.biosoft.graphics.font.ColorFontBeanInfo
      • class biouml.standard.type.DatabaseReferenceBeanInfo
      • class biouml.model.DiagramElementBeanInfo
        • class biouml.model.DiagramBeanInfo
        • class biouml.model.EdgeBeanInfo
        • class biouml.model.NodeBeanInfo
          • class biouml.model.CompartmentBeanInfo
          • class biouml.model.EquivalentNodeGroupBeanInfo
      • class biouml.workbench.diagram.DiagramElementInfoBeanInfo
      • class biouml.model.DiagramViewOptionsBeanInfo
      • class ru.biosoft.gui.EditorsManagerBeanInfo
      • class biouml.model.dynamics.EModelBeanInfo
      • class biouml.model.dynamics.EquationBeanInfo
      • class ru.biosoft.access.search.FilteringSettingsBeanInfo
      • class ru.biosoft.plugins.javascript.FunctionInfo.ArgumentBeanInfo
      • class ru.biosoft.plugins.javascript.FunctionInfo.ExampleBeanInfo
      • class ru.biosoft.plugins.javascript.FunctionInfo.ExceptionBeanInfo
      • class ru.biosoft.plugins.javascript.FunctionInfo.ReturnedValueBeanInfo
      • class ru.biosoft.plugins.javascript.FunctionInfoBeanInfo
      • class biouml.standard.diagram.GeneNetworkDiagramTypeBeanInfo
      • class biouml.standard.type.GenericEntityBeanInfo
        • class biouml.standard.type.KineticTypeBeanInfo
        • class biouml.standard.type.ReferrerBeanInfo
          • class biouml.standard.type.ConceptBeanInfo
            • class biouml.standard.type.CompartmentBeanInfo
              • class biouml.standard.type.CellBeanInfo
            • class biouml.standard.type.FunctionBeanInfo
            • class biouml.standard.type.MoleculeBeanInfo
              • class biouml.standard.type.BiopolymerBeanInfo
                • class biouml.standard.type.GeneBeanInfo
                • class biouml.standard.type.ProteinBeanInfo
                • class biouml.standard.type.RNABeanInfo
              • class biouml.standard.type.SubstanceBeanInfo
            • class biouml.standard.type.ProcessBeanInfo
            • class biouml.standard.type.StateBeanInfo
          • class biouml.standard.type.ConstantBeanInfo
          • class biouml.standard.type.DatabaseInfoBeanInfo
          • class biouml.standard.type.DiagramInfoBeanInfo
          • class biouml.standard.type.ReactionBeanInfo
          • class biouml.standard.type.SemanticRelationBeanInfo
        • class biouml.standard.type.SpecieReferenceBeanInfo
        • class biouml.standard.type.UnitBeanInfo
      • class ru.biosoft.plugins.javascript.HostObjectInfoBeanInfo
      • class biouml.standard.type.ImageDescriptorBeanInfo
      • class ru.biosoft.util.KeyValuePairBeanInfo
      • class biouml.standard.type.KineticLawBeanInfo
      • class biouml.standard.type.KineticType.ElementBeanInfo
      • class biouml.standard.type.LiteratureReferenceBeanInfo
      • class biouml.standard.diagram.MetabolicPathwayDiagramTypeBeanInfo
      • class biouml.model.ModuleBeanInfo
      • class biouml.plugins.sbw.ModuleDescriptorBeanInfo
      • class biouml.model.NodeInfoBeanInfo
      • class biouml.standard.diagram.PathwayDiagramTypeBeanInfo
      • class biouml.standard.diagram.PathwaySimulationDiagramTypeBeanInfo
      • class ru.biosoft.graphics.PenBeanInfo
      • class biouml.plugins.simulation.plot.PlotBeanInfo
      • class biouml.plugins.simulation.plot.PlotExBeanInfo
      • class biouml.workbench.PreferencesBeanInfo
      • class ru.biosoft.plugins.javascript.PropertyInfoBeanInfo
      • class ru.biosoft.access.search.PropertyValueFilterBeanInfo
      • class biouml.model.QueryOptionsBeanInfo
        • class biouml.standard.PathwayQueryOptionsBeanInfo
      • class ru.biosoft.graphics.RulerOptionsBeanInfo
      • class biouml.plugins.sbw.SbwModuleBeanInfo
      • class biouml.plugins.sbw.SbwServiceBeanInfo
      • class biouml.plugins.sbw.SbwServiceCategoryBeanInfo
      • class biouml.plugins.sbw.SbwServiceMethodBeanInfo
      • class biouml.plugins.sbw.SbwVisiblePluginBeanInfo
      • class biouml.standard.diagram.SemanticNetworkDiagramTypeBeanInfo
      • class biouml.plugins.simulation.plot.SeriesBeanInfo
      • class biouml.plugins.sbw.ServiceDescriptorBeanInfo
      • class biouml.plugins.simulation.SimulationEngineBeanInfo
        • class biouml.plugins.simulation.java.JavaSimulationEngineBeanInfo
        • class biouml.plugins.matlab.MatlabSimulationEngineBeanInfo
      • class biouml.plugins.simulation.SimulationResultBeanInfo
      • class biouml.plugins.sbml.SpecieBeanInfo
      • class biouml.standard.type.Stub.NoteBeanInfo
      • class biouml.standard.type.Stub.NoteLinkBeanInfo
      • class biouml.standard.filter.ValueActionBeanInfo
      • class biouml.standard.filter.ValueActionFilterBeanInfo
        • class biouml.standard.filter.BiopolimerDiagramFilter.CellTypeFilterBeanInfo
        • class biouml.standard.filter.BiopolimerDiagramFilter.InducerFilterBeanInfo
        • class biouml.standard.filter.BiopolimerDiagramFilter.SpeciesFilterBeanInfo
      • class biouml.model.dynamics.VariableBeanInfo
      • class biouml.model.dynamics.VariableRoleBeanInfo
      • class ru.biosoft.access.VectorDataCollectionBeanInfo
        • class ru.biosoft.plugins.javascript.JScriptVisiblePluginBeanInfo
        • class ru.biosoft.access.LocalRepositoryBeanInfo
        • class ru.biosoft.access.SqlDataCollectionBeanInfo
        • class ru.biosoft.access.TransformedDataCollectionBeanInfo
  • class ru.biosoft.math.parser.SimpleCharStream
  • class com.beanexplorer.web.SimpleHtmlFormatter (implements com.beanexplorer.web.HtmlFormatter)
    • class biouml.plugins.sbw.SbwHost.TextHtmlFormatter
  • class ru.biosoft.math.model.SimpleNode (implements ru.biosoft.math.model.Node)
    • class ru.biosoft.math.model.AstConstant
    • class ru.biosoft.math.model.AstFunctionDeclaration (implements ru.biosoft.math.model.Function, ru.biosoft.math.model.ParserContext)
    • class ru.biosoft.math.model.AstFunNode
    • class ru.biosoft.math.model.AstPiece
    • class ru.biosoft.math.model.AstPiecewise
    • class ru.biosoft.math.model.AstStart
    • class ru.biosoft.math.model.AstVarNode
    • class ru.biosoft.math.model.ControlActions
    • class ru.biosoft.math.model.ControlTrigger
    • class ru.biosoft.math.model.StateChartControl
  • class biouml.plugins.simulation.SimulationControl
  • class biouml.plugins.simulation.SimulationEngine.VariableType
  • class biouml.plugins.simulation.SimulatorInfo
  • class ru.biosoft.util.SoftFileBuffer.Buffer
  • class biouml.plugins.simulation.Span
  • class ru.biosoft.access.SqlConnectionPool
  • class ru.biosoft.access.SqlDataCollection.SQLIterator (implements java.util.Iterator)
  • class ru.biosoft.access.SqlTransformerSupport (implements ru.biosoft.access.SqlTransformer)
    • class biouml.plugins.simulation.plot.access.PlotSqlTransformer
    • class biouml.standard.type.access.ReferrerSqlTransformer
      • class biouml.standard.type.access.ConceptSqlTransformer
        • class biouml.standard.type.access.BiopolymerSqlTransformer
          • class biouml.standard.type.access.GeneSqlTransformer
          • class biouml.standard.type.access.ProteinSqlTransformer
          • class biouml.standard.type.access.RNASqlTransformer
        • class biouml.standard.type.access.CellSqlTransformer
        • class biouml.standard.type.access.CompartmentSqlTransformer
        • class biouml.standard.type.access.SubstanceSqlTransformer
      • class biouml.standard.type.access.DatabaseInfoSqlTransformer
      • class biouml.standard.type.access.DiagramSqlTransformer
      • class biouml.standard.type.access.ReactionSqlTransformer
      • class biouml.standard.type.access.RelationSqlTransformer
    • class biouml.standard.type.access.RelationTypeSqlTransformer
    • class biouml.plugins.simulation.access.SimulationResultSqlTransformer
    • class biouml.standard.type.access.SpeciesSqlTransformer
    • class biouml.standard.type.access.UnitSqlTransformer
  • class biouml.standard.StandardModuleActivator (implements biouml.model.util.ModuleActivator)
  • class biouml.plugins.simulation.hybrid.State
  • class biouml.plugins.simulation.hybrid.StateChart
  • class biouml.plugins.simulation.ode.StdMet
  • class biouml.plugins.simulation.ode.StiffnessDetector
  • class biouml.plugins.svg.SvgDiagramExporter (implements biouml.model.DiagramExporter)
  • class ru.biosoft.access.support.TagCommandSupport (implements ru.biosoft.access.support.TagCommand)
  • class TestCase
    • class biouml.plugins.sbml._test.SbmlWriterTest
  • class TestCase
    • class biouml.plugins.sbml._test.SbmlSemanticTest
  • class TestCase
    • class biouml.plugins.sbml._test.SbmlReaderTest
  • class TestCase
    • class biouml.plugins.sbml._test.SbmlMatlabTest
  • class TestCase
    • class biouml.plugins.sbml._test.SbmlJavaTest
  • class TestCase
    • class biouml.plugins.sbml._test.AutoTest
  • class biouml.plugins.sbml._test.TestListParser
  • class biouml.plugins.sbml._test.TestListParser.Category
  • class ru.biosoft.util.TextUtil
  • class java.lang.Throwable (implements java.io.Serializable)
    • class java.lang.Error
      • class ru.biosoft.math.parser.TokenMgrError
    • class java.lang.Exception
      • class ru.biosoft.access.DataCollectionVetoException
      • class com.developmentontheedge.jobcontrol.JobControlException
      • class ru.biosoft.math.parser.ParseException
      • class java.lang.RuntimeException
        • class ru.biosoft.util.ChainRuntimeException
  • class ru.biosoft.math.parser.Token
  • class biouml.plugins.simulation.hybrid.Trigger
  • class ru.biosoft.math.model.UndeclaredFunction (implements ru.biosoft.math.model.Function)
  • class ru.biosoft.graphics.View
    • class ru.biosoft.graphics.CompositeView
      • class ru.biosoft.graphics.ArrowView
      • class ru.biosoft.graphics.Ruler
    • class ru.biosoft.graphics.HtmlView
    • class ru.biosoft.graphics.ImageView (implements java.awt.image.ImageObserver)
    • class ru.biosoft.graphics.LineView
    • class ru.biosoft.graphics.ShapeView
      • class ru.biosoft.graphics.BoxView
      • class ru.biosoft.graphics.EllipseView
      • class ru.biosoft.graphics.PathView
      • class ru.biosoft.graphics.PolygonView
        • class ru.biosoft.graphics.PolylineView
    • class ru.biosoft.graphics.TextView
  • class ru.biosoft.workbench.ViewDescriptor
  • class ru.biosoft.graphics.editor.ViewPaneAdapter (implements ru.biosoft.graphics.editor.ViewPaneListener)
    • class ru.biosoft.graphics.editor.SelectionManager
      • class ru.biosoft.graphics.editor.MultipleSelectionManager
        • class ru.biosoft.graphics.editor.ResizableSelectionManager
  • class ru.biosoft.workbench.ViewRegistry
  • class ru.biosoft.gui.wizard.WizardTools
  • class ru.biosoft.workbench.Workbench (implements org.eclipse.core.boot.IPlatformRunnable)
  • class java.io.Writer
    • class biouml.plugins.simulation.MathWriter
    • class java.io.PrintWriter
      • class com.developmentontheedge.log.TextPaneAppender.TracerPrintWriter

Interface Hierarchy

• interface biouml.standard.filter.Action
• interface biouml.standard.filter.ActionFilter
• interface ru.biosoft.access.repository.ActionsProvider
• interface biouml.plugins.simulation.ae.AeModel
• interface com.developmentontheedge.application.ApplicationDocument
• interface com.developmentontheedge.application.ApplicationRegistry
• interface biouml.plugins.simulation.ode.Btheta
• interface biouml.plugins.cellml.CellMLConstants
• interface ru.biosoft.access.CreateDataCollectionController
• interface ru.biosoft.access.DataElement
  • interface biouml.standard.type.Base (also extends biouml.standard.type.Type)
    • interface biouml.standard.type.Relation
  • interface ru.biosoft.access.CollectionUnion
  • interface ru.biosoft.access.DataCollection
    • interface ru.biosoft.access.CollectionUnion
  • interface biouml.model.ModuleType
  • interface ru.biosoft.access.MutableDataElement
  • interface biouml.standard.type.Relation
• interface biouml.model.DiagramExporter
• interface biouml.model.DiagramFilter
• interface biouml.model.DiagramImporter
• interface biouml.model.DiagramType
• interface biouml.model.DiagramTypeConverter
• interface biouml.model.DiagramViewBuilder
• interface com.developmentontheedge.application.DocumentFactory
• interface biouml.plugins.cellml.DomHelper
• interface java.util.EventListener
  • interface ru.biosoft.access.DataCollectionListener
    • interface ru.biosoft.access.QuerySystem
  • interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable, ru.biosoft.gui.ViewPart)
  • interface ru.biosoft.access.QuerySystem
  • interface com.beanexplorer.undo.TransactionListener
    • interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable, ru.biosoft.gui.ViewPart)
    • interface ru.biosoft.gui.ViewPart
      • interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable)
  • interface ru.biosoft.gui.ViewPart
    • interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable)
• interface biouml.model.dynamics.ExpressionOwner
• interface ru.biosoft.access.Filter
  • interface ru.biosoft.access.QueryFilter
• interface ru.biosoft.math.model.Formatter
• interface biouml.model.dynamics.FormulaDelegate
• interface ru.biosoft.math.model.Function
• interface biouml.plugins.gxl.GxlConstants
  • interface biouml.plugins.ginsim.GinSimConstants
• interface biouml.model.util.ImageGenerator.ReferenceGenerator
• interface biouml.plugins.matlab.JMatLinkInterface
• interface com.developmentontheedge.jobcontrol.JobControlListener
• interface ru.biosoft.access.Key
• interface biouml.standard.type.LocalisedString
• interface java.util.Map
  • interface ru.biosoft.access.Index
• interface biouml.plugins.simulation.Model
  • interface biouml.plugins.simulation.ode.OdeModel
• interface ru.biosoft.gui.ModelValidator
• interface biouml.model.util.ModuleActivator
• interface ru.biosoft.math.model.Node
• interface ru.biosoft.math.model.Parser
• interface ru.biosoft.math.parser.ParserConstants
• interface ru.biosoft.math.model.ParserContext
• interface ru.biosoft.math.parser.ParserTreeConstants
• interface ru.biosoft.workbench.PerspectiveFactory
• interface biouml.standard.type.ProteinProperties
• interface biouml.model.QueryEngine
• interface ru.biosoft.access.Repository
• interface ru.biosoft.access.repository.RepositoryListener
• interface biouml.plugins.simulation.ResultListener
• interface biouml.model.Role
  • interface biouml.model.dynamics.EModelRole
• interface java.lang.Runnable
  • interface com.developmentontheedge.jobcontrol.JobControl
• interface biouml.model.SemanticController
• interface ru.biosoft.access.support.SerializableAsText
• interface biouml.plugins.simulation.Simulator
• interface biouml.standard.type.SpeciesSpecific
• interface ru.biosoft.access.SqlTransformer
• interface biouml.plugins.sbml._test.Status
• interface ru.biosoft.access.support.TagCommand
• interface biouml.plugins.sbml._test.TestLogger
• interface com.beanexplorer.undo.Transactable
  • interface ru.biosoft.gui.EditorPart (also extends ru.biosoft.gui.ViewPart)
• interface ru.biosoft.access.Transformer
• interface biouml.standard.type.Type
  • interface biouml.standard.type.Base (also extends ru.biosoft.access.DataElement)
    • interface biouml.standard.type.Relation
  • interface biouml.standard.type.Relation
• interface ru.biosoft.math.model.VariableResolver
• interface ru.biosoft.graphics.editor.ViewEditorHelper
• interface ru.biosoft.graphics.editor.ViewPaneListener
• interface ru.biosoft.graphics.editor.ViewSelector
• interface ru.biosoft.gui.wizard.Wizard
• interface ru.biosoft.gui.wizard.WizardStep
• interface ru.biosoft.gui.wizard.WizardTarget