biouml.standard.type.access
Class ReactionTransformer

java.lang.Object
  ru.biosoft.access.AbstractTransformer
      ru.biosoft.access.support.TagEntryTransformer
          ru.biosoft.access.support.BeanInfoEntryTransformer
              biouml.standard.type.access.ReactionTransformer

All Implemented Interfaces:

Transformer

public class ReactionTransformer

extends BeanInfoEntryTransformer

Pendung:

refine

Field Summary

protected BeanInfoEntryTransformer	kineticLawTransformer
protected BeanInfoEntryTransformer	specieReferenceTransformer

Fields inherited from class ru.biosoft.access.support.TagEntryTransformer

commands, endl, log, outputType, processedObject, tagOrder

Fields inherited from class ru.biosoft.access.AbstractTransformer

lineSep, primaryCollection, transformedCollection

Constructor Summary

ReactionTransformer()

Method Summary

void	init(DataCollection primaryCollection, DataCollection transformedCollection) Initialize transformer.
protected java.lang.String	readSection(java.io.BufferedReader reader)
DataElement	transformInput(DataElement input) Read Reaction object from Entry object.
DataElement	transformOutput(DataElement input) Write Reaction object to Entry object.

Methods inherited from class ru.biosoft.access.support.BeanInfoEntryTransformer

getEndTag, getStartTag, initCommands

Methods inherited from class ru.biosoft.access.support.TagEntryTransformer

addCommand, getInputType, getOutputType, getProcessedObject, readObject, removeCommand, writeObject

Methods inherited from class ru.biosoft.access.AbstractTransformer

getPrimaryCollection, getTransformedCollection, isInputType, isOutputType

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

kineticLawTransformer

protected BeanInfoEntryTransformer kineticLawTransformer

specieReferenceTransformer

protected BeanInfoEntryTransformer specieReferenceTransformer

Constructor Detail

ReactionTransformer

public ReactionTransformer()

Method Detail

init

public void init(DataCollection primaryCollection,
                 DataCollection transformedCollection)

Description copied from class: BeanInfoEntryTransformer

Initialize transformer.

Specified by:

init in interface Transformer

Overrides:

init in class BeanInfoEntryTransformer

See Also:

AbstractTransformer.getPrimaryCollection(), AbstractTransformer.getTransformedCollection()

readSection

protected java.lang.String readSection(java.io.BufferedReader reader)
                                throws java.lang.Exception

Throws:

java.lang.Exception

transformInput

public DataElement transformInput(DataElement input)
                           throws java.lang.Exception

Read Reaction object from Entry object.

Specified by:

transformInput in interface Transformer

Overrides:

transformInput in class TagEntryTransformer

Throws:

java.lang.Exception

transformOutput

public DataElement transformOutput(DataElement input)
                            throws java.lang.Exception

Write Reaction object to Entry object.

Specified by:

transformOutput in interface Transformer

Overrides:

transformOutput in class TagEntryTransformer

Throws:

java.lang.Exception