biouml.standard.type
Class DatabaseInfo

java.lang.Object
  com.beanexplorer.beans.Option
      ru.biosoft.access.MutableDataElementSupport
          biouml.standard.type.BaseSupport
              biouml.standard.type.GenericEntity
                  biouml.standard.type.Referrer
                      biouml.standard.type.DatabaseInfo

All Implemented Interfaces:

Base, DataElement, MutableDataElement, Type

public class DatabaseInfo

extends Referrer

Many data elements can refer to other databases through its database references field. This class is used to describe basic information about this databases as well as to describe rules how information from corresponding databases can be retrieved.

Field Summary

Fields inherited from class biouml.standard.type.GenericEntity

comment

Fields inherited from class biouml.standard.type.BaseSupport

title, type

Fields inherited from class ru.biosoft.access.MutableDataElementSupport

name

Fields inherited from class com.beanexplorer.beans.Option

notificationEnabled, propagationEnabled

Fields inherited from interface biouml.standard.type.Type

CONSTANT, DATABASE_INFO, DIAGRAM_INFO, MATH, MATH_EQUATION, MATH_EVENT, MATH_FUNCTION, MATH_STATE, MATH_TRANSITION, TYPE_CELL, TYPE_CHEMICAL_ROLE, TYPE_COMPARTMENT, TYPE_CONCEPT, TYPE_DIAGRAM_REFERENCE, TYPE_FUNCTION, TYPE_GENE, TYPE_MOLECULE, TYPE_NOTE, TYPE_NOTE_LINK, TYPE_PROCESS, TYPE_PROTEIN, TYPE_REACTION, TYPE_RELATION, TYPE_RNA, TYPE_SEMANTIC_RELATION, TYPE_STATE, TYPE_SUBSTANCE, TYPE_UNKNOWN

Constructor Summary

DatabaseInfo(DataCollection parent, java.lang.String name)

Method Summary

java.lang.String	getQueryByAc() Template to get database entry through http.
java.lang.String	getQueryById() Template to get database entry through http.
java.lang.String	getType()
java.lang.String	getURL() Database URL.
void	setQueryByAc(java.lang.String queryByAc)
void	setQueryById(java.lang.String queryById)
void	setURL(java.lang.String url)

Methods inherited from class biouml.standard.type.Referrer

getDatabaseReferences, getDescription, getLiteratureReferences, setDatabaseReferences, setDescription, setLiteratureReferences

Methods inherited from class biouml.standard.type.GenericEntity

getComment, getDate, setComment, setDate

Methods inherited from class biouml.standard.type.BaseSupport

getTitle, setTitle

Methods inherited from class ru.biosoft.access.MutableDataElementSupport

getName, getOrigin, toString

Methods inherited from class com.beanexplorer.beans.Option

addPropertyChangeListener, copyListenersTo, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getParent, isNotificationEnabled, isPropagationEnabled, removePropertyChangeListener, setNotificationEnabled, setParent, setPropagationEnabled

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface ru.biosoft.access.DataElement

getName, getOrigin

Methods inherited from interface ru.biosoft.access.MutableDataElement

addPropertyChangeListener, removePropertyChangeListener

Constructor Detail

DatabaseInfo

public DatabaseInfo(DataCollection parent,
                    java.lang.String name)

Method Detail

getType

public java.lang.String getType()

Specified by:

getType in interface Base

Overrides:

getType in class BaseSupport

getURL

public java.lang.String getURL()

Database URL.

setURL

public void setURL(java.lang.String url)

getQueryById

public java.lang.String getQueryById()

Template to get database entry through http. For this purpose it is neccessary to replace '$id$' by real id (primary key) in the template.

setQueryById

public void setQueryById(java.lang.String queryById)

getQueryByAc

public java.lang.String getQueryByAc()

Template to get database entry through http. For this purpose it is neccessary to replace '$ac$' by real ac (secondary key or accession number) in the template.

setQueryByAc

public void setQueryByAc(java.lang.String queryByAc)