biouml.plugins.sbml._test
Class SbmlTestSimulationEngineAdapter

java.lang.Object
  biouml.plugins.sbml._test.SbmlTestSimulationEngineAdapter

public class SbmlTestSimulationEngineAdapter

extends java.lang.Object

Batch unit test for biouml.model package.

Constructor Summary

SbmlTestSimulationEngineAdapter()

Method Summary

static boolean	almostEqual(double a, double b)
void	compareResults(java.lang.String testDirectory, java.lang.String testName, TestLogger logger)
static java.lang.String	getMangledName(java.lang.String name)
static java.util.Map	getMangledNamesMap(java.util.Map variableMap)
protected double	getVarInitialValue(java.lang.String varName)
SimulationResult	prepareValues(java.lang.String[] requiredVariables, EModel model, java.util.Map mangledMap, TestLogger logger)
void	processTest(SimulationEngine engine, java.lang.String testDirectory, java.lang.String testName, java.lang.String sbmlLevel, TestLogger logger)
void	readSimulationParameters(SimulationEngine engine, java.lang.String testDirectory, java.lang.String testName)
static boolean	significantlyDiffer(double a, double b)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SbmlTestSimulationEngineAdapter

public SbmlTestSimulationEngineAdapter()

Method Detail

processTest

public void processTest(SimulationEngine engine,
                        java.lang.String testDirectory,
                        java.lang.String testName,
                        java.lang.String sbmlLevel,
                        TestLogger logger)

readSimulationParameters

public void readSimulationParameters(SimulationEngine engine,
                                     java.lang.String testDirectory,
                                     java.lang.String testName)
                              throws java.lang.Exception

Throws:

java.lang.Exception

compareResults

public void compareResults(java.lang.String testDirectory,
                           java.lang.String testName,
                           TestLogger logger)
                    throws java.lang.Exception

Throws:

java.lang.Exception

prepareValues

public SimulationResult prepareValues(java.lang.String[] requiredVariables,
                                      EModel model,
                                      java.util.Map mangledMap,
                                      TestLogger logger)

getVarInitialValue

protected double getVarInitialValue(java.lang.String varName)

almostEqual

public static boolean almostEqual(double a,
                                  double b)

significantlyDiffer

public static boolean significantlyDiffer(double a,
                                          double b)

getMangledName

public static java.lang.String getMangledName(java.lang.String name)

getMangledNamesMap

public static java.util.Map getMangledNamesMap(java.util.Map variableMap)