biouml.plugins.sbml
Class SbmlModelFactory

java.lang.Object
  biouml.plugins.sbml.SbmlModelFactory

public class SbmlModelFactory

extends java.lang.Object

Utility class to read/write diagrams in SBML format. Factory design pattern is used to process different levels and versions of SBML format.

Field Summary

protected static org.apache.log4j.Category

log

Constructor Summary

SbmlModelFactory()

Method Summary

static org.w3c.dom.Document	createDOM(Diagram diagram)
static Diagram	readDiagram(java.io.File file, DataCollection origin, java.lang.String diagramName)
static void	writeDiagram(java.io.File file, Diagram sourceDiagram)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

log

protected static org.apache.log4j.Category log

Constructor Detail

SbmlModelFactory

public SbmlModelFactory()

Method Detail

readDiagram

public static Diagram readDiagram(java.io.File file,
                                  DataCollection origin,
                                  java.lang.String diagramName)
                           throws java.lang.Exception

Throws:

java.lang.Exception

createDOM

public static org.w3c.dom.Document createDOM(Diagram diagram)
                                      throws java.lang.Exception

Throws:

java.lang.Exception

writeDiagram

public static void writeDiagram(java.io.File file,
                                Diagram sourceDiagram)
                         throws java.lang.Exception

Throws:

java.lang.Exception