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## Uses of Class
biouml.model.Module

Packages that use Module
biouml.model |
biouml.model.htmlgen |
biouml.model.util |
biouml.plugins.cellml |
biouml.plugins.ginsim |
biouml.plugins.sbml |
biouml.plugins.simulation |
biouml.plugins.simulation.plot |
biouml.standard |
biouml.workbench |
biouml.workbench.diagram |
biouml.workbench.module |

Uses of Module in biouml.model

Methods in biouml.model that return Module
`Module` | `ModuleType.createModule(Repository parent, java.lang.String name)` Creates empty module with initialised internal structure.
`static Module` | `Module.getModule(DataElement element)`

Methods in biouml.model with parameters of type Module
`void` | `DiagramImporter.doImport(Module module, java.io.File file, java.lang.String diagramName)` Imports diagram from the spcified file into the specified module.

Uses of Module in biouml.model.htmlgen

Fields in biouml.model.htmlgen declared as Module
`protected Module` | `GenerateHTMLDialog.module`

Constructors in biouml.model.htmlgen with parameters of type Module
`GenerateHTMLDialog(javax.swing.JDialog dialog, java.lang.String title, Module module, Diagram diagram)`
`GenerateHTMLDialog(javax.swing.JFrame frame, java.lang.String title, Module module, Diagram diagram)`

Uses of Module in biouml.model.util

Methods in biouml.model.util that return Module
`Module` | `ModuleActivator.createModule(javax.swing.JDialog owner, Repository parent, java.util.jar.JarFile moduleFile, java.lang.String classpath, org.apache.log4j.Category cat, CreateDataCollectionController controller)` Creates the module with initialised internal structure from moduleFile .

Methods in biouml.model.util with parameters of type Module
`static void` | `ModulePackager.exportModule(Module module, java.lang.String moduleName, java.lang.String moduleVersion, java.lang.String moduleDescription, java.lang.String filename, FunctionJobControl jobControl, java.util.Set excludedNames)` Export the specified module into distributive file.
`void` | `DiagramXmlWriter.write(Diagram sourceDiagram, Module module)`
`void` | `DiagramXmlWriter.write(Diagram sourceDiagram, Module module, javax.xml.transform.Transformer transformer)`
`Diagram` | `DiagramXmlReader.read(DataCollection origin, Module module)`

Uses of Module in biouml.plugins.cellml

Fields in biouml.plugins.cellml declared as Module
`protected Module` | `CellMLSupport.module`

Methods in biouml.plugins.cellml that return Module
`Module` | `CellMLModuleType.createModule(Repository parent, java.lang.String name)`

Methods in biouml.plugins.cellml with parameters of type Module
`Diagram` | `CellMLModelReader.read(DataCollection origin, Module module)`
`void` | `CellMLImporter.doImport(Module module, java.io.File file, java.lang.String diagramName)`

Uses of Module in biouml.plugins.ginsim

Methods in biouml.plugins.ginsim with parameters of type Module
`void` | `GinMLImporter.doImport(Module module, java.io.File file, java.lang.String diagramName)`

Uses of Module in biouml.plugins.sbml

Methods in biouml.plugins.sbml that return Module
`Module` | `SbmlModuleType.createModule(Repository parent, java.lang.String name)`

Methods in biouml.plugins.sbml with parameters of type Module
`void` | `SbmlImporter.doImport(Module module, java.io.File file, java.lang.String diagramName)`

Uses of Module in biouml.plugins.simulation

Methods in biouml.plugins.simulation with parameters of type Module
`protected DataCollection` | `SimulationEnginePane.getSimulationResultDC(Module module)`

Uses of Module in biouml.plugins.simulation.plot

Fields in biouml.plugins.simulation.plot declared as Module
`protected Module` | `PlotEx.module`

Methods in biouml.plugins.simulation.plot that return Module
`Module` | `PlotEx.getModule()`

Constructors in biouml.plugins.simulation.plot with parameters of type Module
`PlotEx(Module module, Plot plot)`
`PlotEx(Module module, SimulationResult result)`
`PlotDialog(javax.swing.JFrame frame, Module module, Plot plot)`
`PlotDialog(javax.swing.JFrame frame, Module module, SimulationResult result)`

Uses of Module in biouml.standard

Methods in biouml.standard that return Module
`Module` | `StandardModuleType.createModule(Repository parent, java.lang.String name)`
`Module` | `StandardModuleActivator.createModule(javax.swing.JDialog parentWindow, Repository parent, java.util.jar.JarFile moduleFile, java.lang.String classpath, org.apache.log4j.Category cat, CreateDataCollectionController controller)` Creates the module with initialised internal structure from moduleFile .

Uses of Module in biouml.workbench

Methods in biouml.workbench with parameters of type Module
`void` | `BioUMLApplication.newDiagram(Module module)`

Uses of Module in biouml.workbench.diagram

Fields in biouml.workbench.diagram declared as Module
`protected Module` | `ImportDiagramDialog.module`

Constructors in biouml.workbench.diagram with parameters of type Module
`NewDiagramDialog(javax.swing.JFrame frame, java.lang.String title, DataCollection repository, Module module)`
`ImportDiagramDialog(Module module)`

Uses of Module in biouml.workbench.module

Fields in biouml.workbench.module declared as Module
`protected Module` | `ModuleExportDialog.module`

Constructors in biouml.workbench.module with parameters of type Module
`ModuleExportDialog(javax.swing.JDialog dialog, java.lang.String title, Module module)`
`ModuleExportDialog(javax.swing.JFrame frame, java.lang.String title, Module module)`

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