Overview | Package | Class | Use | Tree | Deprecated | Help
PREV NEXT | FRAMES NO FRAMES

## Hierarchy For All Packages

Package Hierarchies:
  biouml.model, biouml.model.dynamics, biouml.model.dynamics.resources, biouml.model.htmlgen, biouml.model.util, biouml.plugins.cellml, biouml.plugins.ginsim, biouml.plugins.gxl, biouml.plugins.jgraph, biouml.plugins.matlab, biouml.plugins.matlab.resources, biouml.plugins.sbml, biouml.plugins.sbml._test, biouml.plugins.sbw, biouml.plugins.simulation, biouml.plugins.simulation.access, biouml.plugins.simulation.ae, biouml.plugins.simulation.hybrid, biouml.plugins.simulation.java, biouml.plugins.simulation.ode, biouml.plugins.simulation.plot, biouml.plugins.simulation.plot.access, biouml.plugins.simulation.resources, biouml.plugins.svg, biouml.standard, biouml.standard.diagram, biouml.standard.filter, biouml.standard.type, biouml.standard.type.access, biouml.workbench, biouml.workbench.diagram, biouml.workbench.module, biouml.workbench.resources, com.developmentontheedge.application, com.developmentontheedge.application.action, com.developmentontheedge.application.dialog, com.developmentontheedge.jobcontrol, com.developmentontheedge.jobcontrol.action, com.developmentontheedge.log, com.developmentontheedge.print, ru.biosoft.access, ru.biosoft.access.repository, ru.biosoft.access.search, ru.biosoft.access.support, ru.biosoft.graphics, ru.biosoft.graphics.editor, ru.biosoft.graphics.font, ru.biosoft.gui, ru.biosoft.gui.resources, ru.biosoft.gui.wizard, ru.biosoft.math, ru.biosoft.math.model, ru.biosoft.math.parser, ru.biosoft.math.view, ru.biosoft.math.xml, ru.biosoft.plugins, ru.biosoft.plugins.javascript, ru.biosoft.util, ru.biosoft.workbench

## Class Hierarchy

- class java.lang.Object
  - class javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
    - class ru.biosoft.workbench.AboutAction
    - class com.developmentontheedge.application.action.ApplicationAction
      - class com.developmentontheedge.application.action.ApplicationAction.ActionAboutDialog
      - class com.developmentontheedge.application.action.ApplicationAction.ActionExit
      - class com.developmentontheedge.application.action.ApplicationAction.ActionHelp
      - class com.developmentontheedge.application.action.ApplicationAction.ActionPrint
      - class com.developmentontheedge.application.action.ApplicationAction.ActionPrintPreview
      - class com.developmentontheedge.application.action.ApplicationAction.ActionPrintSetup
    - class biouml.workbench.diagram.CloseDiagramAction
    - class biouml.workbench.diagram.ConvertDiagramAction
    - class ru.biosoft.access.search.DataSearchAction
    - class biouml.workbench.diagram.ExportDiagramAction
    - class biouml.workbench.module.ExportModuleAction
    - class biouml.model.htmlgen.GenerateHTMLAction
    - class ru.biosoft.workbench.HelpAction
    - class biouml.workbench.diagram.ImportDiagramAction
    - class ru.biosoft.graphics.editor.InsertAction
    - class com.developmentontheedge.jobcontrol.action.JobAction
    - class biouml.workbench.module.ModuleSetupAction
    - class biouml.workbench.NewDataElementAction
    - class biouml.workbench.diagram.NewDiagramAction
    - class biouml.workbench.module.NewModuleAction
    - class biouml.workbench.diagram.OpenDiagramAction
    - class biouml.workbench.PreferencesAction
    - class com.developmentontheedge.print.PrintAction
    - class com.developmentontheedge.print.PrintPreviewAction
    - class com.developmentontheedge.print.PrintSetupAction
    - class ru.biosoft.gui.RedoAction
    - class biouml.workbench.RemoveDataElementAction
    - class biouml.workbench.module.RemoveModuleAction
    - class biouml.plugins.simulation.RepositoryActionsProvider.ShowPlotAction
    - class biouml.workbench.diagram.SaveAsDiagramAction
    - class biouml.workbench.diagram.SaveDiagramAction
    - class com.developmentontheedge.application.action.SeparatorAction
    - class com.developmentontheedge.application.action.TogglePanelAction
    - class ru.biosoft.gui.UndoAction
    - class biouml.workbench.diagram.ZoomInAction
    - class biouml.workbench.diagram.ZoomOutAction
  - class com.developmentontheedge.jobcontrol.AbstractJobControl (implements com.developmentontheedge.jobcontrol.JobControl)
    - class com.developmentontheedge.jobcontrol.ClassJobControl
    - class com.developmentontheedge.jobcontrol.FunctionJobControl
      - class biouml.plugins.simulation.SimulatorJobControl
  - class javax.swing.AbstractListModel (implements javax.swing.ListModel, java.io.Serializable)
    - class ru.biosoft.access.support.NameListToListModelAdapter (implements ru.biosoft.access.DataCollectionListener)
      - class ru.biosoft.access.support.NameListToComboBoxModelAdapter (implements javax.swing.ComboBoxModel, javax.swing.MutableComboBoxModel)
  - class java.util.AbstractMap (implements java.util.Map)
    - class ru.biosoft.access.BTreeIndex (implements ru.biosoft.access.Index)
      - class ru.biosoft.access.BTreeRangeIndex
    - class java.util.HashMap (implements java.lang.Cloneable, java.util.Map, java.io.Serializable)
      - class ru.biosoft.util.HashMapSoftValues
      - class ru.biosoft.util.HashMapWeakValues
      - class ru.biosoft.access.MemIndex (implements ru.biosoft.access.Index)
      - class biouml.standard.type.access.TitleSqlIndex (implements javax.swing.ComboBoxModel, ru.biosoft.access.DataCollectionListener, ru.biosoft.access.Index, javax.swing.ListModel)
  - class ru.biosoft.math.model.AbstractParser (implements ru.biosoft.math.model.Parser)
    - class ru.biosoft.math.xml.MathMLParser (implements ru.biosoft.math.parser.ParserTreeConstants)
    - class ru.biosoft.math.parser.Parser (implements ru.biosoft.math.parser.ParserConstants, ru.biosoft.math.parser.ParserTreeConstants)
  - class com.beanexplorer.swing.table.AbstractRowModel (implements com.beanexplorer.swing.table.RowModel)
    - class ru.biosoft.access.support.DataCollectionRowModelAdapter (implements ru.biosoft.access.DataCollectionListener)
  - class ru.biosoft.access.AbstractTransformer (implements ru.biosoft.access.Transformer)
    - class biouml.plugins.cellml.CellMLDiagramTransformer
    - class ru.biosoft.access.support.DatabaseEntryTransformer
    - class biouml.model.util.DiagramXmlTransformer
    - class biouml.plugins.ginsim.GinSimTransformer
    - class biouml.plugins.gxl.GxlTransformer
    - class biouml.plugins.sbml.SbmlDiagramTransformer
    - class ru.biosoft.access.support.TagEntryTransformer
      - class ru.biosoft.access.support.BeanInfoEntryTransformer
        - class biouml.plugins.simulation.plot.access.PlotTransformer
        - class biouml.standard.type.access.ReactionTransformer
        - class biouml.plugins.simulation.access.SimulationResultTransformer
    - class ru.biosoft.access.XMLTransformer
  - class javax.swing.undo.AbstractUndoableEdit (implements java.io.Serializable, javax.swing.undo.UndoableEdit)
    - class ru.biosoft.access.DataCollectionRemoveUndo
      - class ru.biosoft.access.DataCollectionAddUndo
  - class com.developmentontheedge.application.action.ActionInitializer
  - class com.developmentontheedge.application.action.ActionManager
  - class org.apache.log4j.AppenderSkeleton (implements org.apache.log4j.Appender, org.apache.log4j.spi.OptionHandler)
    - class com.developmentontheedge.log.TextPaneAppender
  - class com.developmentontheedge.application.Application
  - class com.developmentontheedge.application.ApplicationUtils
  - class ru.biosoft.util.ApplicationUtils
  - class ru.biosoft.access.search.ArrayPropertyValueFilterBeanInfo.FilterPropertyEditor (implements com.beanexplorer.editors.PropertyEditorEx)
  - class ru.biosoft.graphics.ArrowView.Tip
  - class biouml.workbench.BioUMLLauncher (implements org.eclipse.core.boot.IPlatformRunnable)
  - class ru.biosoft.graphics.editor.BoxSelector (implements ru.biosoft.graphics.editor.ViewSelector)
    - class ru.biosoft.graphics.editor.ResizingBoxSelector
  - class biouml.plugins.simulation.ode.Btableau
  - class biouml.plugins.simulation.ode.BthDopr (implements biouml.plugins.simulation.ode.Btheta)
  - class ru.biosoft.access.BTreeIndex.Block
  - class ru.biosoft.access.BTreeIndex.IntKey (implements ru.biosoft.access.Key)
  - class ru.biosoft.access.BTreeIndex.NodeKey (implements java.util.Map.Entry)
  - class biouml.plugins.cellml.CellMLImporter (implements biouml.model.DiagramImporter)
  - class biouml.plugins.cellml.CellMLSupport (implements biouml.plugins.cellml.CellMLConstants)
    - class biouml.plugins.cellml.CellMLModelReader
    - class biouml.plugins.cellml.CellMLModelWriter
  - class java.lang.ClassLoader
    - class java.security.SecureClassLoader
      - class java.net.URLClassLoader
        - class ru.biosoft.access.CollectionFactory.CollectionClassLoader
  - class ru.biosoft.access.CollectionFactory
  - class java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    - class java.awt.Container
      - class javax.swing.JComponent (implements java.io.Serializable)
        - class javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
          - class javax.swing.JMenuItem (implements javax.accessibility.Accessible, javax.swing.MenuElement)
            - class javax.swing.JMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
              - class com.developmentontheedge.application.ApplicationMenu
        - class ru.biosoft.graphics.font.FontChooser
        - class javax.swing.JComboBox (implements javax.accessibility.Accessible, java.awt.event.ActionListener, java.awt.ItemSelectable, javax.swing.event.ListDataListener)
          - class com.beanexplorer.editors.ColorComboBox
            - class biouml.standard.filter.ActionEditor.ActionComboBox
        - class javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          - class biouml.standard.filter.ActionEditor.ActionRenderer
        - class javax.swing.JMenuBar (implements javax.accessibility.Accessible, javax.swing.MenuElement)
          - class com.developmentontheedge.application.ApplicationMenuBar
        - class javax.swing.JPanel (implements javax.accessibility.Accessible)
          - class ru.biosoft.access.support.AbstractExportDialog.MPanel
          - class ru.biosoft.access.support.AbstractImportDialog.MPanel
          - class com.developmentontheedge.application.ApplicationStatusBar (implements java.awt.event.ActionListener, com.developmentontheedge.jobcontrol.JobControlListener)
          - class ru.biosoft.access.support.DataCollectionMultyChoicePane
          - class biouml.standard.diagram.DiagramElementSelector
          - class biouml.workbench.diagram.DiagramsPane (implements javax.swing.event.ChangeListener)
          - class ru.biosoft.gui.DocumentPane (implements javax.swing.event.ChangeListener)
          - class com.beanexplorer.web.HtmlPane (implements javax.swing.event.HyperlinkListener)
            - class com.beanexplorer.web.HtmlPropertyInspector
              - class ru.biosoft.gui.PropertiesView (implements ru.biosoft.gui.ViewPart)
            - class ru.biosoft.gui.HtmlView (implements ru.biosoft.gui.ViewPart)
              - class biouml.workbench.diagram.LegendView
          - class com.developmentontheedge.jobcontrol.JobControlPane
          - class com.developmentontheedge.log.LogTextPanel
          - class biouml.plugins.matlab.MatlabErrorPane
          - class com.developmentontheedge.application.NamedPanel
          - class com.developmentontheedge.print.PagePreview
          - class com.developmentontheedge.application.PanelManager (implements java.beans.PropertyChangeListener)
            - class ru.biosoft.math.ExpressionEditorPane
            - class ru.biosoft.workbench.WorkbenchPage
          - class biouml.plugins.simulation.plot.PlotEditorPane
          - class biouml.plugins.simulation.plot.PlotPane (implements org.jfree.chart.event.PlotChangeListener, java.beans.PropertyChangeListener, com.beanexplorer.swing.table.RowModelListener)
          - class com.beanexplorer.swing.PropertyInspector (implements com.beanexplorer.swing.b, java.beans.PropertyChangeListener, com.beanexplorer.undo.Transactable)
            - class ru.biosoft.gui.PropertiesEditor (implements ru.biosoft.gui.EditorPart)
          - class biouml.standard.diagram.ReactionPane
          - class ru.biosoft.access.repository.RepositoryPane
          - class biouml.standard.diagram.SemanticRelationPane
            - class biouml.standard.diagram.NoteLinkPane
          - class biouml.plugins.simulation.SimulationPane
          - class com.beanexplorer.swing.TabularPropertyInspector (implements com.beanexplorer.swing.b, com.beanexplorer.undo.Transactable)
            - class ru.biosoft.gui.TabularPropertiesEditor (implements ru.biosoft.gui.EditorPart)
              - class biouml.workbench.diagram.ParametersTabularEditor (implements java.beans.PropertyChangeListener)
                - class biouml.workbench.diagram.VariablesTabularEditor
          - class com.developmentontheedge.application.dialog.TextButtonField
            - class com.developmentontheedge.application.dialog.BrowseTextField
          - class ru.biosoft.graphics.editor.ViewPane (implements java.awt.event.MouseListener, java.awt.event.MouseMotionListener)
            - class ru.biosoft.graphics.editor.ViewEditorPane (implements java.awt.event.KeyListener, com.beanexplorer.undo.Transactable, com.beanexplorer.undo.TransactionListener)
          - class ru.biosoft.graphics.editor.ViewPane.MPanel
          - class ru.biosoft.gui.ViewPartSupport (implements ru.biosoft.gui.ViewPart)
            - class biouml.workbench.diagram.ClipboardView (implements javax.swing.event.ListSelectionListener, ru.biosoft.graphics.editor.ViewPaneListener)
            - class ru.biosoft.gui.EditorPartSupport (implements ru.biosoft.gui.EditorPart)
              - class ru.biosoft.gui.EditorsTabbedPane
                - class ru.biosoft.gui.ExplorerPane
                - class ru.biosoft.gui.PluggedEditorsTabbedPane
              - class ru.biosoft.gui.HtmlEditor
                - class biouml.workbench.diagram.DiagramDescriptionEditor
              - class ru.biosoft.plugins.javascript.JScriptConsole
              - class biouml.plugins.simulation.SimulationEnginePane
                - class biouml.plugins.simulation.java.JavaEngineControl
                - class biouml.plugins.matlab.MatlabEngineControl
            - class biouml.workbench.diagram.FilterView
            - class ru.biosoft.gui.LogPane
          - class ru.biosoft.gui.wizard.WizardPanel (implements ru.biosoft.gui.wizard.Wizard)
        - class javax.swing.JPopupMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
          - class com.developmentontheedge.application.ApplicationPopupMenu
        - class javax.swing.JProgressBar (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          - class com.developmentontheedge.jobcontrol.JobProgressBar (implements com.developmentontheedge.jobcontrol.JobControlListener)
        - class javax.swing.JTabbedPane (implements javax.accessibility.Accessible, java.io.Serializable, javax.swing.SwingConstants)
          - class ru.biosoft.workbench.PageManager
        - class javax.swing.text.JTextComponent (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          - class javax.swing.JTextArea
            - class ru.biosoft.plugins.javascript.EvalTextArea (implements javax.swing.event.DocumentListener, java.awt.event.KeyListener)
        - class javax.swing.JToolBar (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          - class com.developmentontheedge.application.ApplicationToolBar
      - class java.awt.Window (implements javax.accessibility.Accessible)
        - class java.awt.Dialog
          - class javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            - class ru.biosoft.workbench.AboutDialog
            - class ru.biosoft.access.CreateDataCollectionDefaultController (implements ru.biosoft.access.CreateDataCollectionController)
              - class ru.biosoft.access.support.AbstractImportDialog.ImportController
            - class com.developmentontheedge.application.dialog.OkCancelDialog
              - class ru.biosoft.access.support.AbstractExportDialog
              - class ru.biosoft.access.support.AbstractImportDialog
              - class biouml.workbench.AskIDDialog
              - class biouml.plugins.sbml.CreateDiagramElementDialog
              - class biouml.standard.diagram.CreateDiagramElementDialog
              - class biouml.standard.diagram.CreateEdgeDialog
              - class biouml.standard.diagram.CreateReactionDialog
              - class ru.biosoft.math.ExpressionEditorDialog
              - class biouml.model.htmlgen.GenerateHTMLDialog
              - class biouml.plugins.matlab.MatlabErrorDialog
              - class biouml.workbench.module.ModuleExportDialog
              - class biouml.workbench.module.ModuleInfoDialog
              - class biouml.workbench.module.ModuleReplaceDialog
              - class biouml.workbench.module.ModulesActivatingDialog
              - class biouml.workbench.diagram.NewDiagramDialog
              - class biouml.workbench.module.NewModuleDialog
              - class biouml.plugins.simulation.plot.PlotDialog
              - class biouml.workbench.diagram.ProcessDiagramDialog
                - class biouml.workbench.diagram.ConvertDiagramDialog
                - class biouml.workbench.diagram.ExportDiagramDialog
                - class biouml.workbench.diagram.ImportDiagramDialog
              - class biouml.workbench.module.StatusInfoDialog (implements com.developmentontheedge.jobcontrol.JobControlListener)
            - class ru.biosoft.util.OkCancelDialog
              - class ru.biosoft.access.support.DataCollectionMultyChoiceDialog
              - class ru.biosoft.access.support.NewDataElementDialog
            - class biouml.workbench.PreferencesDialog
            - class com.developmentontheedge.print.PreviewDialog
            - class ru.biosoft.gui.wizard.WizardDialog (implements ru.biosoft.gui.wizard.Wizard)
        - class java.awt.Frame (implements java.awt.MenuContainer)
          - class javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            - class com.developmentontheedge.application.ApplicationFrame
              - class biouml.workbench.BioUMLApplication (implements javax.swing.event.ChangeListener)
              - class ru.biosoft.workbench.WorkbenchWindow
            - class ru.biosoft.access.search.DataSearch (implements java.beans.PropertyChangeListener)
            - class ru.biosoft.gui.wizard.WizardFrame (implements ru.biosoft.gui.wizard.Wizard)
  - class biouml.standard.filter.CompositeHighlightAction (implements biouml.standard.filter.Action)
  - class com.developmentontheedge.jobcontrol.CurrentJobControl
  - class biouml.model.dynamics.DAEModelUtilities
  - class biouml.model.dynamics.DAEModelUtilities.EquationASTPair
  - class ru.biosoft.access.DataCollectionInfo
  - class ru.biosoft.access.DataCollectionListenerSupport (implements ru.biosoft.access.DataCollectionListener)
  - class ru.biosoft.access.repository.DataCollectionTreeModelAdapter (implements ru.biosoft.access.DataCollectionListener, javax.swing.tree.TreeModel)
  - class ru.biosoft.access.DataCollectionUndoListener (implements ru.biosoft.access.DataCollectionListener, java.beans.PropertyChangeListener)
  - class ru.biosoft.access.DataElementSupport (implements ru.biosoft.access.DataElement)
    - class ru.biosoft.access.AbstractDataCollection (implements ru.biosoft.access.DataCollection)
      - class ru.biosoft.access.DataCollectionUnion (implements ru.biosoft.access.CollectionUnion)
      - class ru.biosoft.access.DerivedDataCollection
        - class ru.biosoft.access.FilteredDataCollection (implements ru.biosoft.access.DataCollectionListener)
        - class biouml.model.Module
        - class ru.biosoft.access.TransformedDataCollection (implements ru.biosoft.access.DataCollectionListener)
        - class biouml.model.dynamics.VariablesDataCollection
      - class ru.biosoft.access.EntryCollection
        - class ru.biosoft.access.FileEntryCollection
        - class ru.biosoft.access.FileEntryCollection2
      - class ru.biosoft.access.SqlDataCollection
      - class ru.biosoft.access.VectorDataCollection
        - class ru.biosoft.access.DataCollectionUnion2 (implements ru.biosoft.access.CollectionUnion, ru.biosoft.access.DataCollectionListener)
        - class ru.biosoft.access.FileCollection
        - class ru.biosoft.plugins.javascript.HostObjectInfo
          - class ru.biosoft.plugins.javascript.ClassInfo
        - class ru.biosoft.access.LocalRepository (implements ru.biosoft.access.Repository)
        - class ru.biosoft.plugins.Plugins
        - class biouml.plugins.sbw.SbwModule
        - class biouml.plugins.sbw.SbwService
        - class biouml.plugins.sbw.SbwServiceCategory
      - class ru.biosoft.plugins.VisiblePlugin
        - class ru.biosoft.plugins.javascript.JScriptVisiblePlugin
        - class biouml.plugins.sbw.SbwVisiblePlugin
    - class biouml.plugins.cellml.CellMLModuleType (implements biouml.model.ModuleType)
    - class ru.biosoft.access.DataElementRef
    - class ru.biosoft.access.Entry
    - class ru.biosoft.access.FileDataElement
    - class ru.biosoft.plugins.javascript.FunctionInfo
    - class ru.biosoft.plugins.javascript.PropertyInfo
    - class biouml.plugins.sbml.SbmlModuleType (implements biouml.model.ModuleType)
    - class biouml.plugins.simulation.SimulationResult
    - class biouml.standard.StandardModuleType (implements biouml.model.ModuleType)
      - class biouml.standard.SqlModuleType
  - class biouml.model.DefaultDiagramViewBuilder (implements biouml.model.DiagramViewBuilder)
    - class biouml.model.dynamics.EModelDiagramViewBuilder
    - class biouml.plugins.ginsim.GinSimDiagramViewBuilder
    - class biouml.standard.diagram.PathwayDiagramViewBuilder
      - class biouml.standard.diagram.GeneNetworkDiagramType.GeneNetworkDiagramViewBuilder
      - class biouml.standard.diagram.MetabolicPathwayDiagramType.MetabolicPathwayDiagramViewBuilder
      - class biouml.standard.diagram.PathwaySimulationDiagramViewBuilder
        - class biouml.plugins.cellml.CellMLDiagramViewBuilder
        - class biouml.plugins.sbml.SbmlDiagramViewBuilder
      - class biouml.standard.diagram.SemanticNetworkDiagramType.SemanticNetworkDiagramViewBuilder
  - class org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    - class biouml.plugins.gxl.GxlReader.GxlHandler (implements biouml.plugins.gxl.GxlConstants)
      - class biouml.plugins.ginsim.GinSimReader.GinSimHandler (implements biouml.plugins.ginsim.GinSimConstants)
  - class ru.biosoft.math.model.DefaultParserContext (implements ru.biosoft.math.model.ParserContext)
  - class ru.biosoft.access.DefaultQuerySystem (implements ru.biosoft.access.QuerySystem)
  - class biouml.model.DefaultSemanticController (implements biouml.model.SemanticController)
    - class biouml.standard.diagram.PathwaySemanticController
      - class biouml.standard.diagram.PathwaySimulationSemanticController
        - class biouml.plugins.cellml.CellMLSemanticController
        - class biouml.plugins.sbml.SbmlSemanticController
  - class biouml.plugins.sbml._test.DefaultTestLogger (implements biouml.plugins.sbml._test.TestLogger)
    - class biouml.plugins.sbml._test.HtmlStatisticsLogger
  - class ru.biosoft.graphics.editor.DefaultViewEditorHelper (implements ru.biosoft.graphics.editor.ViewEditorHelper)
  - class biouml.workbench.diagram.DiagramEditorHelper (implements com.beanexplorer.undo.TransactionListener, ru.biosoft.graphics.editor.ViewEditorHelper)
  - class biouml.workbench.diagram.DiagramElementInfo
  - class biouml.workbench.diagram.DiagramExporterRegistry
  - class biouml.workbench.diagram.DiagramExporterRegistry.ExporterInfo
  - class biouml.workbench.diagram.DiagramFactory (implements com.developmentontheedge.application.DocumentFactory)
  - class biouml.workbench.diagram.DiagramImageWriter (implements biouml.model.DiagramExporter)
  - class biouml.workbench.diagram.DiagramImporterRegistry
  - class biouml.workbench.diagram.DiagramImporterRegistry.ImporterInfo
  - class biouml.standard.type.access.DiagramSqlTransformer.SqlReferenceGenerator (implements biouml.model.util.ImageGenerator.ReferenceGenerator)
  - class biouml.plugins.jgraph.DiagramToJGraphTransformer
  - class biouml.model.DiagramTypeConverter.NoConverter (implements biouml.model.DiagramTypeConverter)
  - class biouml.model.DiagramTypeConverter.YesConverter (implements biouml.model.DiagramTypeConverter)
    - class biouml.model.DiagramTypeConverter.ConditionalConverter
  - class biouml.workbench.diagram.DiagramTypeConverterRegistry
  - class biouml.workbench.diagram.DiagramTypeConverterRegistry.Conversion
  - class biouml.model.DiagramTypeSupport (implements biouml.model.DiagramType)
    - class biouml.plugins.cellml.CellMLDiagramType
    - class biouml.model.dynamics.EModelDiagramType
    - class biouml.plugins.ginsim.GinSimDiagramType
    - class biouml.standard.diagram.PathwayDiagramType
      - class biouml.standard.diagram.GeneNetworkDiagramType
      - class biouml.standard.diagram.MetabolicPathwayDiagramType
      - class biouml.standard.diagram.PathwaySimulationDiagramType
      - class biouml.standard.diagram.SemanticNetworkDiagramType
    - class biouml.plugins.sbml.SbmlDiagramType
      - class biouml.plugins.sbml.SbmlDiagramType_L1
      - class biouml.plugins.sbml.SbmlDiagramType_L2
  - class biouml.model.util.DiagramXmlConstants
    - class biouml.model.util.DiagramXmlSupport
      - class biouml.model.util.DiagramXmlReader
      - class biouml.model.util.DiagramXmlWriter
  - class java.util.Dictionary
    - class java.util.Hashtable (implements java.lang.Cloneable, java.util.Map, java.io.Serializable)
      - class ru.biosoft.access.IndexTable
      - class java.util.Properties
        - class ru.biosoft.util.ExProperties
        - class com.developmentontheedge.application.MapRegistry (implements com.developmentontheedge.application.ApplicationRegistry)
  - class ru.biosoft.gui.Document (implements com.developmentontheedge.application.ApplicationDocument)
    - class biouml.workbench.diagram.DiagramDocument (implements java.beans.PropertyChangeListener)
    - class ru.biosoft.gui.RepositoryDocument (implements java.beans.PropertyChangeListener, ru.biosoft.access.repository.RepositoryListener)
  - class com.developmentontheedge.application.DocumentManager
    - class ru.biosoft.gui.DocumentManager
  - class biouml.plugins.cellml.DomElementTransformer
  - class biouml.plugins.cellml.DomHelperSupport (implements biouml.plugins.cellml.DomHelper)
    - class biouml.plugins.cellml.RdfHelper
  - class biouml.plugins.simulation.ode.DormandPrince (implements biouml.plugins.simulation.Simulator)
  - class biouml.plugins.simulation.ode.DormandPrince.Options
  - class com.beanexplorer.beans.DynamicProperty
    - class ru.biosoft.access.support.DatabaseField
      - class ru.biosoft.access.support.StringField
  - class com.beanexplorer.beans.DynamicPropertySetSupport (implements com.beanexplorer.beans.DynamicPropertySet)
    - class ru.biosoft.access.support.DatabaseEntry (implements ru.biosoft.access.MutableDataElement)
  - class biouml.standard.type.EditionHistory (implements java.beans.PropertyChangeListener)
  - class biouml.standard.type.EditionHistory.Edition
  - class ru.biosoft.gui.EditorsManager (implements ru.biosoft.gui.ViewPart)
  - class ru.biosoft.gui.EditorsManager.EditorInfo
  - class biouml.model.dynamics.EModel.VariableFilter (implements ru.biosoft.access.Filter)
  - class biouml.model.dynamics.EModelDiagramViewOptions
  - class ru.biosoft.access.support.EntryParser
  - class biouml.plugins.simulation.ode.ErrorEstimator
  - class biouml.plugins.simulation.hybrid.Event
    - class biouml.plugins.simulation.hybrid.Transition
  - class biouml.plugins.simulation.java.EventLoopSimulator (implements biouml.plugins.simulation.Simulator)
  - class java.util.EventObject (implements java.io.Serializable)
    - class java.awt.AWTEvent
      - class java.awt.event.ComponentEvent
        - class java.awt.event.InputEvent
          - class java.awt.event.MouseEvent
            - class ru.biosoft.graphics.editor.ViewPaneEvent
    - class ru.biosoft.access.DataCollectionEvent
  - class ru.biosoft.util.FileBuffer
    - class ru.biosoft.util.ConservativeFastFileBuffer
    - class ru.biosoft.util.FastFileBuffer
    - class ru.biosoft.util.SoftFileBuffer
  - class ru.biosoft.util.FileChooserRegistry
  - class javax.swing.filechooser.FileFilter
    - class biouml.workbench.module.BMDFileFilter
    - class biouml.model.htmlgen.XSLFileFilter
  - class ru.biosoft.access.Filter.IncludeAllFilter (implements ru.biosoft.access.Filter)
  - class ru.biosoft.access.Filter.IncludeNoneFilter (implements ru.biosoft.access.Filter)
  - class ru.biosoft.access.search.FilteringSettings
  - class java.awt.event.FocusAdapter (implements java.awt.event.FocusListener)
    - class ru.biosoft.gui.HtmlEditor.DocumentFocusListener
  - class ru.biosoft.math.view.FormulaViewBuilder
  - class biouml.model.util.Framework
  - class ru.biosoft.plugins.javascript.FunctionInfo.Argument
  - class ru.biosoft.plugins.javascript.FunctionInfo.Example
  - class ru.biosoft.plugins.javascript.FunctionInfo.Exception
  - class ru.biosoft.plugins.javascript.FunctionInfo.ReturnedValue
  - class biouml.plugins.ginsim.GinMLExporter (implements biouml.model.DiagramExporter)
  - class biouml.plugins.ginsim.GinMLImporter (implements biouml.model.DiagramImporter)
  - class ru.biosoft.graphics.GraphicProperties
  - class biouml.plugins.gxl.GxlExporter (implements biouml.model.DiagramExporter)
  - class biouml.plugins.gxl.GxlParserContext
    - class biouml.plugins.ginsim.GinSimParserContext
  - class biouml.plugins.gxl.GxlSupport (implements biouml.plugins.gxl.GxlConstants)
    - class biouml.plugins.gxl.GxlReader
      - class biouml.plugins.ginsim.GinSimReader
    - class biouml.plugins.gxl.GxlWriter
      - class biouml.plugins.ginsim.GinSimWriter
  - class ru.biosoft.workbench.HelpRegistry
  - class biouml.standard.filter.HideAction (implements biouml.standard.filter.Action)
  - class biouml.standard.filter.HighlightAction (implements biouml.standard.filter.Action)
  - class ru.biosoft.access.support.IdGenerator
  - class biouml.model.util.ImageGenerator
  - class ru.biosoft.access.Index.IndexEntry
    - class ru.biosoft.access.Index.StringIndexEntry
  - class biouml.plugins.simulation.ode.Initsss
  - class ru.biosoft.graphics.editor.InverseSelector (implements ru.biosoft.graphics.editor.ViewSelector)
  - class biouml.plugins.simulation.java.JavaBaseModel (implements biouml.plugins.simulation.ae.AeModel, biouml.plugins.simulation.ode.OdeModel)
  - class biouml.plugins.simulation.java.JavaError
  - class biouml.plugins.matlab.JMatLinkFactory
  - class biouml.plugins.matlab.JMatLinkJDK14 (implements biouml.plugins.matlab.JMatLinkInterface)
  - class com.developmentontheedge.jobcontrol.JobControlEvent
  - class com.developmentontheedge.jobcontrol.JobControlListenerAdapter (implements com.developmentontheedge.jobcontrol.JobControlListener)
  - class ru.biosoft.plugins.javascript.JScriptContext
  - class ru.biosoft.plugins.javascript.JScriptHelp
  - class ru.biosoft.plugins.javascript.JScriptRunner (implements org.eclipse.core.boot.IPlatformRunnable)
  - class ru.biosoft.plugins.javascript.JScriptShell (implements org.eclipse.core.boot.IPlatformRunnable)
  - class ru.biosoft.util.KeyValuePair
  - class biouml.standard.type.KineticType.Element (implements ru.biosoft.access.support.SerializableAsText)
  - class com.developmentontheedge.print.LargePageable (implements java.awt.print.Pageable)
    - class com.developmentontheedge.print.JPrintableComponent (implements java.awt.print.Printable)
  - class com.developmentontheedge.print.LargePageable.TranslatedPrintable (implements java.awt.print.Printable)
  - class ru.biosoft.math.model.LinearFormatter (implements ru.biosoft.math.model.Formatter)
    - class ru.biosoft.math.model.PiecewiseExtFormatter
      - class ru.biosoft.math.model.JavaFormatter
      - class ru.biosoft.math.model.MatlabFormatter
  - class ru.biosoft.math.xml.MathMLFormatter (implements ru.biosoft.math.model.Formatter)
  - class ru.biosoft.math.xml.MathMLParser.CSymbol
  - class ru.biosoft.math.MathRoutines
  - class biouml.plugins.matlab.MatlabError
  - class biouml.model.util.ModulePackager
  - class biouml.plugins.simulation.ae.NewtonSolver
  - class biouml.model.NodeInfo
  - class biouml.plugins.simulation.ode.ODEFileWriter
  - class biouml.plugins.simulation.ode.OdeSimulator (implements biouml.plugins.simulation.Simulator)
  - class com.beanexplorer.beans.Option
    - class biouml.model.AbstractFilter (implements biouml.model.DiagramFilter)
      - class biouml.standard.filter.BiopolimerDiagramFilter
    - class biouml.model.dynamics.Assignment (implements biouml.model.dynamics.ExpressionOwner)
    - class ru.biosoft.graphics.Brush
    - class ru.biosoft.graphics.font.ColorFont
    - class biouml.standard.type.DatabaseReference (implements ru.biosoft.access.support.SerializableAsText)
    - class biouml.model.DiagramViewOptions
      - class biouml.standard.diagram.PathwayDiagramViewOptions
        - class biouml.standard.diagram.GeneNetworkDiagramType.GeneNetworkDiagramViewOptions
        - class biouml.standard.diagram.MetabolicPathwayDiagramType.MetabolicPathwayDiagramViewOptions
        - class biouml.standard.diagram.PathwaySimulationDiagramViewOptions
        - class biouml.standard.diagram.SemanticNetworkDiagramType.SemanticNetworkDiagramViewOptions
    - class biouml.model.dynamics.EModelRoleSupport (implements biouml.model.dynamics.EModelRole)
      - class biouml.model.dynamics.EModel (implements ru.biosoft.access.DataCollectionListener, ru.biosoft.math.model.ParserContext, java.beans.PropertyChangeListener)
      - class biouml.model.dynamics.Equation (implements biouml.model.dynamics.ExpressionOwner)
      - class biouml.model.dynamics.Event (implements biouml.model.dynamics.ExpressionOwner)
      - class biouml.model.dynamics.Function (implements biouml.model.dynamics.ExpressionOwner)
      - class biouml.model.dynamics.State (implements biouml.model.dynamics.ExpressionOwner)
      - class biouml.model.dynamics.Transition (implements biouml.model.dynamics.ExpressionOwner)
    - class ru.biosoft.math.Expression
    - class biouml.standard.type.ImageDescriptor (implements java.awt.image.ImageObserver)
    - class biouml.standard.type.KineticLaw
    - class ru.biosoft.access.MutableDataElementSupport (implements ru.biosoft.access.MutableDataElement)
      - class biouml.standard.type.BaseSupport (implements biouml.standard.type.Base)
        - class biouml.standard.type.GenericEntity
          - class biouml.standard.type.Referrer
            - class biouml.standard.type.Concept
              - class biouml.standard.type.Compartment
                - class biouml.standard.type.Cell
              - class biouml.standard.type.DiagramReference
              - class biouml.standard.type.Function
              - class biouml.standard.type.Molecule
                - class biouml.standard.type.Biopolymer
                  - class biouml.standard.type.Gene
                  - class biouml.standard.type.Protein
                  - class biouml.standard.type.RNA
                - class biouml.standard.type.Substance
              - class biouml.standard.type.Process
              - class biouml.standard.type.State
            - class biouml.standard.type.Constant
            - class biouml.standard.type.DatabaseInfo
            - class biouml.standard.type.DiagramInfo
              - class biouml.plugins.cellml.DiagramInfo
            - class biouml.standard.type.Reaction (implements ru.biosoft.access.DataCollection, biouml.model.dynamics.FormulaDelegate)
              - class biouml.plugins.cellml.Reaction
            - class biouml.standard.type.SemanticRelation (implements biouml.standard.type.Relation)
          - class biouml.standard.type.SpecieReference (implements biouml.model.dynamics.FormulaDelegate, biouml.standard.type.Relation, ru.biosoft.access.support.SerializableAsText)
        - class biouml.plugins.ginsim.GinSimEdgeKernel
        - class biouml.plugins.ginsim.GinSimNodeKernel
        - class biouml.plugins.sbml.Specie
        - class biouml.plugins.cellml.Species
        - class biouml.standard.type.Stub
          - class biouml.standard.type.Stub.Note
          - class biouml.standard.type.Stub.NoteLink
      - class biouml.model.DiagramElement
        - class biouml.model.Edge
        - class biouml.model.Node
          - class biouml.model.Compartment (implements ru.biosoft.access.DataCollection)
            - class biouml.model.Diagram (implements java.beans.PropertyChangeListener)
            - class biouml.model.EquivalentNodeGroup
      - class biouml.standard.type.KineticType
      - class biouml.standard.type.LiteratureReference
      - class biouml.plugins.simulation.plot.Plot
      - class biouml.standard.type.RelationType
      - class biouml.standard.type.Species
      - class biouml.standard.type.Unit
      - class biouml.model.dynamics.Variable
        - class biouml.model.dynamics.VariableRole (implements biouml.model.dynamics.EModelRole)
    - class ru.biosoft.access.MutableFilter (implements ru.biosoft.access.Filter)
      - class ru.biosoft.access.search.ArrayPropertyValueFilter
      - class ru.biosoft.access.CompositeFilter
        - class ru.biosoft.access.search.BeanValueFilter
      - class ru.biosoft.access.PatternFilter
      - class ru.biosoft.access.search.PropertyValueFilter
    - class ru.biosoft.graphics.Pen
    - class biouml.plugins.simulation.plot.PlotEx
    - class ru.biosoft.graphics.RulerOptions
    - class biouml.plugins.simulation.plot.Series
    - class biouml.plugins.simulation.SimulationEngine
      - class biouml.plugins.simulation.java.JavaSimulationEngine
      - class biouml.plugins.matlab.MatlabSimulationEngine
    - class biouml.standard.filter.ValueAction
    - class biouml.standard.filter.ValueActionFilter (implements biouml.standard.filter.ActionFilter)
      - class biouml.standard.filter.BiopolimerDiagramFilter.CellTypeFilter
      - class biouml.standard.filter.BiopolimerDiagramFilter.InducerFilter
      - class biouml.standard.filter.BiopolimerDiagramFilter.SpeciesFilter
  - class java.io.OutputStream
    - class java.io.ByteArrayOutputStream
      - class biouml.plugins.simulation.java.RunTimeCompiler.ErrorOutputStream
  - class java.awt.print.PageFormat (implements java.lang.Cloneable)
    - class com.developmentontheedge.print.FooterFormat
  - class com.developmentontheedge.application.PanelInfo
  - class ru.biosoft.math.parser.ParserTokenManager (implements ru.biosoft.math.parser.ParserConstants)
  - class biouml.standard.diagram.PathwayDiagramViewOptions.RelationTypeColor
  - class biouml.standard.diagram.PathwayDiagramViewOptions.RelationTypeStroke
  - class ru.biosoft.workbench.PerspectiveDescriptor
  - class ru.biosoft.workbench.PerspectiveDescriptor.View
  - class ru.biosoft.workbench.PerspectiveRegistry
  - class org.eclipse.core.runtime.Plugin (implements org.osgi.framework.BundleActivator)
    - class biouml.workbench.BioUMLPlugin
  - class ru.biosoft.access.repository.PluginActions (implements ru.biosoft.access.repository.ActionsProvider)
  - class ru.biosoft.math.model.PredefinedFunction (implements ru.biosoft.math.model.Function)
  - class biouml.workbench.Preferences (implements com.developmentontheedge.application.ApplicationRegistry, java.lang.Cloneable)
  - class com.developmentontheedge.print.PrintManager
  - class java.beans.PropertyEditorSupport (implements java.beans.PropertyEditor)
    - class com.beanexplorer.editors.CustomEditorSupport (implements java.awt.event.ActionListener, com.beanexplorer.editors.PropertyEditorEx)
      - class biouml.standard.filter.ActionEditor
      - class com.beanexplorer.editors.ColorEditor
        - class ru.biosoft.graphics.BrushEditor
      - class ru.biosoft.access.support.DataCollectionMultyChoicePropertyEditor
        - class biouml.standard.type.ReferrerBeanInfo.LiteratureReferencesEditor
      - class ru.biosoft.graphics.font.FontEditor
    - class biouml.standard.type.MultiLineHtmlFieldEditor
    - class com.beanexplorer.editors.StringTagEditorSupport
      - class biouml.standard.type.ConceptBeanInfo.ConceptTypeEditor
      - class ru.biosoft.access.search.FilteringSettingsBeanInfo.ModuleEditor
      - class biouml.standard.type.KineticType.ElementBeanInfo.RoleEditor
      - class biouml.plugins.simulation.plot.PlotExBeanInfo.PlotNameEditor (implements com.beanexplorer.editors.PropertyEditorEx)
      - class biouml.standard.type.ProteinBeanInfo.FunctionalStateEditor
      - class biouml.standard.type.ProteinBeanInfo.ModificationEditor
      - class biouml.standard.type.ProteinBeanInfo.StructureEditor
      - class biouml.standard.type.RNABeanInfo.RnaTypeEditor
      - class biouml.standard.type.SemanticRelationBeanInfo.ParticipationTypeEditor
      - class biouml.plugins.sbml.SpecieBeanInfo.SpecieTypeEditor
      - class biouml.standard.type.SpecieReferenceBeanInfo.ModifierActionEditor
      - class biouml.standard.type.SpecieReferenceBeanInfo.SpecieReferenceEditor
    - class com.beanexplorer.editors.TagEditorSupport
      - class biouml.model.CompartmentBeanInfo.ShapeTypeEditor
      - class biouml.model.DiagramFilterActionEditor
      - class ru.biosoft.access.search.FilteringSettingsBeanInfo.TypeEditor (implements com.beanexplorer.editors.PropertyEditorEx)
      - class biouml.plugins.sbw.ModuleDescriptorBeanInfo.ManagementTypeEditor
      - class biouml.model.QueryOptionsBeanInfo.DirectionTypeEditor
  - class ru.biosoft.access.search.PropertyValueFilterBeanInfo.FilterPropertyEditor (implements com.beanexplorer.editors.PropertyEditorEx)
  - class biouml.model.QueryEngineSupport (implements biouml.model.QueryEngine)
    - class biouml.standard.PathwayQueryEngine
    - class biouml.standard.StandardQueryEngine
  - class biouml.model.QueryOptions
    - class biouml.standard.PathwayQueryOptions
  - class java.lang.ref.Reference
    - class java.lang.ref.SoftReference
      - class ru.biosoft.util.HashMapSoftValues.SoftValueRef
    - class java.lang.ref.WeakReference
      - class ru.biosoft.util.HashMapWeakValues.WeakValueRef
  - class ru.biosoft.workbench.RegistryReader
    - class ru.biosoft.workbench.PerspectiveRegistry.PerspectiveExtensionRegistryReader
    - class ru.biosoft.workbench.PerspectiveRegistry.PerspectiveRegistryReader
    - class ru.biosoft.workbench.ViewRegistry.ViewRegistryReader
  - class javax.swing.RepaintManager
    - class ru.biosoft.gui.RepaintManager
  - class biouml.plugins.simulation.RepositoryActionsProvider (implements ru.biosoft.access.repository.ActionsProvider)
  - class biouml.workbench.RepositoryActionsProvider (implements ru.biosoft.access.repository.ActionsProvider)
  - class ru.biosoft.access.search.RepositoryActionsProvider (implements ru.biosoft.access.repository.ActionsProvider)
  - class java.util.ResourceBundle
    - class java.util.ListResourceBundle
      - class ru.biosoft.graphics.BrushMessageBundle
      - class ru.biosoft.graphics.font.ColorFontMessageBundle
      - class ru.biosoft.util.KeyValuePairMessageBundle
      - class biouml.model.MessageBundle
      - class biouml.model.dynamics.resources.MessageBundle
      - class biouml.model.util.MessageBundle
      - class biouml.plugins.cellml.MessageBundle
      - class biouml.plugins.ginsim.MessageBundle
      - class biouml.plugins.gxl.MessageBundle
      - class biouml.plugins.matlab.resources.MessageBundle
      - class biouml.plugins.sbml.MessageBundle
      - class biouml.plugins.sbw.MessageBundle
      - class biouml.plugins.simulation.java.MessageBundle
      - class biouml.plugins.simulation.resources.MessageBundle
      - class biouml.standard.MessageBundle
      - class biouml.standard.diagram.MessageBundle
      - class biouml.standard.filter.MessageBundle
      - class biouml.standard.type.MessageBundle
      - class biouml.workbench.resources.MessageBundle
      - class ru.biosoft.access.MessageBundle
      - class ru.biosoft.access.search.MessageBundle
      - class ru.biosoft.access.support.MessageBundle
      - class ru.biosoft.gui.resources.MessageBundle
      - class ru.biosoft.plugins.javascript.MessageBundle
      - class ru.biosoft.workbench.MessageBundle
      - class ru.biosoft.graphics.PenMessageBundle
      - class ru.biosoft.graphics.RulerOptionsMessageBundle
  - class biouml.plugins.simulation.ResultWriter (implements biouml.plugins.simulation.ResultListener)
  - class biouml.plugins.simulation.ode.RootFinder
  - class biouml.plugins.simulation.java.RunTimeCompiler
  - class biouml.plugins.sbml.SbmlConstants
    - class biouml.plugins.sbml.SbmlSupport
      - class biouml.plugins.sbml.SbmlModelReader
        - class biouml.plugins.sbml.SbmlModelReader_11
          - class biouml.plugins.sbml.SbmlModelReader_12
        - class biouml.plugins.sbml.SbmlModelReader_21
      - class biouml.plugins.sbml.SbmlModelWriter
        - class biouml.plugins.sbml.SbmlModelWriter_21
        - class biouml.plugins.sbml.SbmlModelWriter_L1
          - class biouml.plugins.sbml.SbmlModelWriter_11
          - class biouml.plugins.sbml.SbmlModelWriter_12
  - class biouml.plugins.sbml.SbmlExporter (implements biouml.model.DiagramExporter)
  - class biouml.plugins.sbml.SbmlImporter (implements biouml.model.DiagramImporter)
  - class biouml.plugins.sbml._test.SbmlJavaConsoleTest
  - class biouml.plugins.sbml._test.SbmlJavaMain
  - class biouml.plugins.sbml._test.SbmlJavaTestConsol
  - class biouml.plugins.sbml._test.SbmlMatlabConsoleTest
  - class biouml.plugins.sbml.SbmlModelFactory
  - class biouml.plugins.sbml._test.SbmlSemanticCSVHander
  - class biouml.plugins.sbml._test.SbmlTestSimulationEngineAdapter
  - class biouml.plugins.sbw.SbwHost
  - class biouml.plugins.sbw.SbwHost.SbmlModel
  - class biouml.plugins.sbw.SbwServiceMethod (implements ru.biosoft.access.DataElement)
  - class org.mozilla.javascript.ScriptableObject (implements org.mozilla.javascript.debug.DebuggableObject, org.mozilla.javascript.Scriptable, java.io.Serializable)
    - class org.mozilla.javascript.ImporterTopLevel
      - class ru.biosoft.plugins.javascript.Global
  - class ru.biosoft.access.support.SetPropertyCommand (implements ru.biosoft.access.support.TagCommand)
    - class ru.biosoft.access.support.SetArrayPropertyCommand
  - class java.beans.SimpleBeanInfo (implements java.beans.BeanInfo)
    - class com.beanexplorer.beans.BeanInfoEx (implements com.beanexplorer.beans.BeanInfoConstants)
      - class ru.biosoft.access.search.ArrayPropertyValueFilterBeanInfo
      - class ru.biosoft.access.search.BeanValueFilterBeanInfo
      - class biouml.standard.filter.BiopolimerDiagramFilterBeanInfo
      - class ru.biosoft.graphics.BrushBeanInfo
      - class ru.biosoft.graphics.font.ColorFontBeanInfo
      - class biouml.standard.type.DatabaseReferenceBeanInfo
      - class biouml.model.DiagramElementBeanInfo
        - class biouml.model.DiagramBeanInfo
        - class biouml.model.EdgeBeanInfo
        - class biouml.model.NodeBeanInfo
          - class biouml.model.CompartmentBeanInfo
          - class biouml.model.EquivalentNodeGroupBeanInfo
      - class biouml.workbench.diagram.DiagramElementInfoBeanInfo
      - class biouml.model.DiagramViewOptionsBeanInfo
      - class ru.biosoft.gui.EditorsManagerBeanInfo
      - class biouml.model.dynamics.EModelBeanInfo
      - class biouml.model.dynamics.EquationBeanInfo
      - class ru.biosoft.access.search.FilteringSettingsBeanInfo
      - class ru.biosoft.plugins.javascript.FunctionInfo.ArgumentBeanInfo
      - class ru.biosoft.plugins.javascript.FunctionInfo.ExampleBeanInfo
      - class ru.biosoft.plugins.javascript.FunctionInfo.ExceptionBeanInfo
      - class ru.biosoft.plugins.javascript.FunctionInfo.ReturnedValueBeanInfo
      - class ru.biosoft.plugins.javascript.FunctionInfoBeanInfo
      - class biouml.standard.diagram.GeneNetworkDiagramTypeBeanInfo
      - class biouml.standard.type.GenericEntityBeanInfo
        - class biouml.standard.type.KineticTypeBeanInfo
        - class biouml.standard.type.ReferrerBeanInfo
          - class biouml.standard.type.ConceptBeanInfo
            - class biouml.standard.type.CompartmentBeanInfo
              - class biouml.standard.type.CellBeanInfo
            - class biouml.standard.type.FunctionBeanInfo
            - class biouml.standard.type.MoleculeBeanInfo
              - class biouml.standard.type.BiopolymerBeanInfo
                - class biouml.standard.type.GeneBeanInfo
                - class biouml.standard.type.ProteinBeanInfo
                - class biouml.standard.type.RNABeanInfo
              - class biouml.standard.type.SubstanceBeanInfo
            - class biouml.standard.type.ProcessBeanInfo
            - class biouml.standard.type.StateBeanInfo
          - class biouml.standard.type.ConstantBeanInfo
          - class biouml.standard.type.DatabaseInfoBeanInfo
          - class biouml.standard.type.DiagramInfoBeanInfo
          - class biouml.standard.type.ReactionBeanInfo
          - class biouml.standard.type.SemanticRelationBeanInfo
        - class biouml.standard.type.SpecieReferenceBeanInfo
        - class biouml.standard.type.UnitBeanInfo
      - class ru.biosoft.plugins.javascript.HostObjectInfoBeanInfo
      - class biouml.standard.type.ImageDescriptorBeanInfo
      - class ru.biosoft.util.KeyValuePairBeanInfo
      - class biouml.standard.type.KineticLawBeanInfo
      - class biouml.standard.type.KineticType.ElementBeanInfo
      - class biouml.standard.type.LiteratureReferenceBeanInfo
      - class biouml.standard.diagram.MetabolicPathwayDiagramTypeBeanInfo
      - class biouml.model.ModuleBeanInfo
      - class biouml.plugins.sbw.ModuleDescriptorBeanInfo
      - class biouml.model.NodeInfoBeanInfo
      - class biouml.standard.diagram.PathwayDiagramTypeBeanInfo
      - class biouml.standard.diagram.PathwaySimulationDiagramTypeBeanInfo
      - class ru.biosoft.graphics.PenBeanInfo
      - class biouml.plugins.simulation.plot.PlotBeanInfo
      - class biouml.plugins.simulation.plot.PlotExBeanInfo
      - class biouml.workbench.PreferencesBeanInfo
      - class ru.biosoft.plugins.javascript.PropertyInfoBeanInfo
      - class ru.biosoft.access.search.PropertyValueFilterBeanInfo
      - class biouml.model.QueryOptionsBeanInfo
        - class biouml.standard.PathwayQueryOptionsBeanInfo
      - class ru.biosoft.graphics.RulerOptionsBeanInfo
      - class biouml.plugins.sbw.SbwModuleBeanInfo
      - class biouml.plugins.sbw.SbwServiceBeanInfo
      - class biouml.plugins.sbw.SbwServiceCategoryBeanInfo
      - class biouml.plugins.sbw.SbwServiceMethodBeanInfo
      - class biouml.plugins.sbw.SbwVisiblePluginBeanInfo
      - class biouml.standard.diagram.SemanticNetworkDiagramTypeBeanInfo
      - class biouml.plugins.simulation.plot.SeriesBeanInfo
      - class biouml.plugins.sbw.ServiceDescriptorBeanInfo
      - class biouml.plugins.simulation.SimulationEngineBeanInfo
        - class biouml.plugins.simulation.java.JavaSimulationEngineBeanInfo
        - class biouml.plugins.matlab.MatlabSimulationEngineBeanInfo
      - class biouml.plugins.simulation.SimulationResultBeanInfo
      - class biouml.plugins.sbml.SpecieBeanInfo
      - class biouml.standard.type.Stub.NoteBeanInfo
      - class biouml.standard.type.Stub.NoteLinkBeanInfo
      - class biouml.standard.filter.ValueActionBeanInfo
      - class biouml.standard.filter.ValueActionFilterBeanInfo
        - class biouml.standard.filter.BiopolimerDiagramFilter.CellTypeFilterBeanInfo
        - class biouml.standard.filter.BiopolimerDiagramFilter.InducerFilterBeanInfo
        - class biouml.standard.filter.BiopolimerDiagramFilter.SpeciesFilterBeanInfo
      - class biouml.model.dynamics.VariableBeanInfo
      - class biouml.model.dynamics.VariableRoleBeanInfo
      - class ru.biosoft.access.VectorDataCollectionBeanInfo
        - class ru.biosoft.plugins.javascript.JScriptVisiblePluginBeanInfo
        - class ru.biosoft.access.LocalRepositoryBeanInfo
        - class ru.biosoft.access.SqlDataCollectionBeanInfo
        - class ru.biosoft.access.TransformedDataCollectionBeanInfo
  - class ru.biosoft.math.parser.SimpleCharStream
  - class com.beanexplorer.web.SimpleHtmlFormatter (implements com.beanexplorer.web.HtmlFormatter)
    - class biouml.plugins.sbw.SbwHost.TextHtmlFormatter
  - class ru.biosoft.math.model.SimpleNode (implements ru.biosoft.math.model.Node)
    - class ru.biosoft.math.model.AstConstant
    - class ru.biosoft.math.model.AstFunctionDeclaration (implements ru.biosoft.math.model.Function, ru.biosoft.math.model.ParserContext)
    - class ru.biosoft.math.model.AstFunNode
    - class ru.biosoft.math.model.AstPiece
    - class ru.biosoft.math.model.AstPiecewise
    - class ru.biosoft.math.model.AstStart
    - class ru.biosoft.math.model.AstVarNode
    - class ru.biosoft.math.model.ControlActions
    - class ru.biosoft.math.model.ControlTrigger
    - class ru.biosoft.math.model.StateChartControl
  - class biouml.plugins.simulation.SimulationControl
  - class biouml.plugins.simulation.SimulationEngine.VariableType
  - class biouml.plugins.simulation.SimulatorInfo
  - class ru.biosoft.util.SoftFileBuffer.Buffer
  - class biouml.plugins.simulation.Span
  - class ru.biosoft.access.SqlConnectionPool
  - class ru.biosoft.access.SqlDataCollection.SQLIterator (implements java.util.Iterator)
  - class ru.biosoft.access.SqlTransformerSupport (implements ru.biosoft.access.SqlTransformer)
    - class biouml.plugins.simulation.plot.access.PlotSqlTransformer
    - class biouml.standard.type.access.ReferrerSqlTransformer
      - class biouml.standard.type.access.ConceptSqlTransformer
        - class biouml.standard.type.access.BiopolymerSqlTransformer
          - class biouml.standard.type.access.GeneSqlTransformer
          - class biouml.standard.type.access.ProteinSqlTransformer
          - class biouml.standard.type.access.RNASqlTransformer
        - class biouml.standard.type.access.CellSqlTransformer
        - class biouml.standard.type.access.CompartmentSqlTransformer
        - class biouml.standard.type.access.SubstanceSqlTransformer
      - class biouml.standard.type.access.DatabaseInfoSqlTransformer
      - class biouml.standard.type.access.DiagramSqlTransformer
      - class biouml.standard.type.access.ReactionSqlTransformer
      - class biouml.standard.type.access.RelationSqlTransformer
    - class biouml.standard.type.access.RelationTypeSqlTransformer
    - class biouml.plugins.simulation.access.SimulationResultSqlTransformer
    - class biouml.standard.type.access.SpeciesSqlTransformer
    - class biouml.standard.type.access.UnitSqlTransformer
  - class biouml.standard.StandardModuleActivator (implements biouml.model.util.ModuleActivator)
  - class biouml.plugins.simulation.hybrid.State
  - class biouml.plugins.simulation.hybrid.StateChart
  - class biouml.plugins.simulation.ode.StdMet
  - class biouml.plugins.simulation.ode.StiffnessDetector
  - class biouml.plugins.svg.SvgDiagramExporter (implements biouml.model.DiagramExporter)
  - class ru.biosoft.access.support.TagCommandSupport (implements ru.biosoft.access.support.TagCommand)
  - class TestCase
    - class biouml.plugins.sbml._test.SbmlWriterTest
  - class TestCase
    - class biouml.plugins.sbml._test.SbmlSemanticTest
  - class TestCase
    - class biouml.plugins.sbml._test.SbmlReaderTest
  - class TestCase
    - class biouml.plugins.sbml._test.SbmlMatlabTest
  - class TestCase
    - class biouml.plugins.sbml._test.SbmlJavaTest
  - class TestCase
    - class biouml.plugins.sbml._test.AutoTest
  - class biouml.plugins.sbml._test.TestListParser
  - class biouml.plugins.sbml._test.TestListParser.Category
  - class ru.biosoft.util.TextUtil
  - class java.lang.Throwable (implements java.io.Serializable)
    - class java.lang.Error
      - class ru.biosoft.math.parser.TokenMgrError
    - class java.lang.Exception
      - class ru.biosoft.access.DataCollectionVetoException
      - class com.developmentontheedge.jobcontrol.JobControlException
      - class ru.biosoft.math.parser.ParseException
      - class java.lang.RuntimeException
        - class ru.biosoft.util.ChainRuntimeException
  - class ru.biosoft.math.parser.Token
  - class biouml.plugins.simulation.hybrid.Trigger
  - class ru.biosoft.math.model.UndeclaredFunction (implements ru.biosoft.math.model.Function)
  - class ru.biosoft.graphics.View
    - class ru.biosoft.graphics.CompositeView
      - class ru.biosoft.graphics.ArrowView
      - class ru.biosoft.graphics.Ruler
    - class ru.biosoft.graphics.HtmlView
    - class ru.biosoft.graphics.ImageView (implements java.awt.image.ImageObserver)
    - class ru.biosoft.graphics.LineView
    - class ru.biosoft.graphics.ShapeView
      - class ru.biosoft.graphics.BoxView
      - class ru.biosoft.graphics.EllipseView
      - class ru.biosoft.graphics.PathView
      - class ru.biosoft.graphics.PolygonView
        - class ru.biosoft.graphics.PolylineView
    - class ru.biosoft.graphics.TextView
  - class ru.biosoft.workbench.ViewDescriptor
  - class ru.biosoft.graphics.editor.ViewPaneAdapter (implements ru.biosoft.graphics.editor.ViewPaneListener)
    - class ru.biosoft.graphics.editor.SelectionManager
      - class ru.biosoft.graphics.editor.MultipleSelectionManager
        - class ru.biosoft.graphics.editor.ResizableSelectionManager
  - class ru.biosoft.workbench.ViewRegistry
  - class ru.biosoft.gui.wizard.WizardTools
  - class ru.biosoft.workbench.Workbench (implements org.eclipse.core.boot.IPlatformRunnable)
  - class java.io.Writer
    - class biouml.plugins.simulation.MathWriter
    - class java.io.PrintWriter
      - class com.developmentontheedge.log.TextPaneAppender.TracerPrintWriter

## Interface Hierarchy

- interface biouml.standard.filter.Action
- interface biouml.standard.filter.ActionFilter
- interface ru.biosoft.access.repository.ActionsProvider
- interface biouml.plugins.simulation.ae.AeModel
- interface com.developmentontheedge.application.ApplicationDocument
- interface com.developmentontheedge.application.ApplicationRegistry
- interface biouml.plugins.simulation.ode.Btheta
- interface biouml.plugins.cellml.CellMLConstants
- interface ru.biosoft.access.CreateDataCollectionController
- interface ru.biosoft.access.DataElement
  - interface biouml.standard.type.Base (also extends biouml.standard.type.Type)
    - interface biouml.standard.type.Relation
  - interface ru.biosoft.access.CollectionUnion
  - interface ru.biosoft.access.DataCollection
    - interface ru.biosoft.access.CollectionUnion
  - interface biouml.model.ModuleType
  - interface ru.biosoft.access.MutableDataElement
  - interface biouml.standard.type.Relation
- interface biouml.model.DiagramExporter
- interface biouml.model.DiagramFilter
- interface biouml.model.DiagramImporter
- interface biouml.model.DiagramType
- interface biouml.model.DiagramTypeConverter
- interface biouml.model.DiagramViewBuilder
- interface com.developmentontheedge.application.DocumentFactory
- interface biouml.plugins.cellml.DomHelper
- interface java.util.EventListener
  - interface ru.biosoft.access.DataCollectionListener
    - interface ru.biosoft.access.QuerySystem
  - interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable, ru.biosoft.gui.ViewPart)
  - interface ru.biosoft.access.QuerySystem
  - interface com.beanexplorer.undo.TransactionListener
    - interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable, ru.biosoft.gui.ViewPart)
    - interface ru.biosoft.gui.ViewPart
      - interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable)
  - interface ru.biosoft.gui.ViewPart
    - interface ru.biosoft.gui.EditorPart (also extends com.beanexplorer.undo.Transactable)
- interface biouml.model.dynamics.ExpressionOwner
- interface ru.biosoft.access.Filter
  - interface ru.biosoft.access.QueryFilter
- interface ru.biosoft.math.model.Formatter
- interface biouml.model.dynamics.FormulaDelegate
- interface ru.biosoft.math.model.Function
- interface biouml.plugins.gxl.GxlConstants
  - interface biouml.plugins.ginsim.GinSimConstants
- interface biouml.model.util.ImageGenerator.ReferenceGenerator
- interface biouml.plugins.matlab.JMatLinkInterface
- interface com.developmentontheedge.jobcontrol.JobControlListener
- interface ru.biosoft.access.Key
- interface biouml.standard.type.LocalisedString
- interface java.util.Map
  - interface ru.biosoft.access.Index
- interface biouml.plugins.simulation.Model
  - interface biouml.plugins.simulation.ode.OdeModel
- interface ru.biosoft.gui.ModelValidator
- interface biouml.model.util.ModuleActivator
- interface ru.biosoft.math.model.Node
- interface ru.biosoft.math.model.Parser
- interface ru.biosoft.math.parser.ParserConstants
- interface ru.biosoft.math.model.ParserContext
- interface ru.biosoft.math.parser.ParserTreeConstants
- interface ru.biosoft.workbench.PerspectiveFactory
- interface biouml.standard.type.ProteinProperties
- interface biouml.model.QueryEngine
- interface ru.biosoft.access.Repository
- interface ru.biosoft.access.repository.RepositoryListener
- interface biouml.plugins.simulation.ResultListener
- interface biouml.model.Role
  - interface biouml.model.dynamics.EModelRole
- interface java.lang.Runnable
  - interface com.developmentontheedge.jobcontrol.JobControl
- interface biouml.model.SemanticController
- interface ru.biosoft.access.support.SerializableAsText
- interface biouml.plugins.simulation.Simulator
- interface biouml.standard.type.SpeciesSpecific
- interface ru.biosoft.access.SqlTransformer
- interface biouml.plugins.sbml._test.Status
- interface ru.biosoft.access.support.TagCommand
- interface biouml.plugins.sbml._test.TestLogger
- interface com.beanexplorer.undo.Transactable
  - interface ru.biosoft.gui.EditorPart (also extends ru.biosoft.gui.ViewPart)
- interface ru.biosoft.access.Transformer
- interface biouml.standard.type.Type
  - interface biouml.standard.type.Base (also extends ru.biosoft.access.DataElement)
    - interface biouml.standard.type.Relation
  - interface biouml.standard.type.Relation
- interface ru.biosoft.math.model.VariableResolver
- interface ru.biosoft.graphics.editor.ViewEditorHelper
- interface ru.biosoft.graphics.editor.ViewPaneListener
- interface ru.biosoft.graphics.editor.ViewSelector
- interface ru.biosoft.gui.wizard.Wizard
- interface ru.biosoft.gui.wizard.WizardStep
- interface ru.biosoft.gui.wizard.WizardTarget

Overview | Package | Class | Use | Tree | Deprecated | Help
PREV NEXT | FRAMES NO FRAMES

Copyright © 2001-2003 Biosof.Ru. All Rights Reserved.