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## biouml.standard.type.access
Class ReactionTransformer

    java.lang.Object
      ru.biosoft.access.AbstractTransformer
          ru.biosoft.access.support.TagEntryTransformer
              ru.biosoft.access.support.BeanInfoEntryTransformer
                  biouml.standard.type.access.ReactionTransformer

All Implemented Interfaces:
  Transformer

public class ReactionTransformer
extends BeanInfoEntryTransformer

Pendung:
  refine

Field Summary
`protected BeanInfoEntryTransformer` | `kineticLawTransformer`
`protected BeanInfoEntryTransformer` | `specieReferenceTransformer`

Fields inherited from class ru.biosoft.access.support.TagEntryTransformer
`commands, endl, log, outputType, processedObject, tagOrder`

Fields inherited from class ru.biosoft.access.AbstractTransformer
`lineSep, primaryCollection, transformedCollection`

Constructor Summary
`ReactionTransformer()`

Method Summary
`void` | `init(DataCollection primaryCollection, DataCollection transformedCollection)` Initialize transformer.
`protected java.lang.String` | `readSection(java.io.BufferedReader reader)`
`DataElement` | `transformInput(DataElement input)` Read Reaction object from Entry object.
`DataElement` | `transformOutput(DataElement input)` Write Reaction object to Entry object.

Methods inherited from class ru.biosoft.access.support.BeanInfoEntryTransformer
`getEndTag, getStartTag, initCommands`

Methods inherited from class ru.biosoft.access.support.TagEntryTransformer
`addCommand, getInputType, getOutputType, getProcessedObject, readObject, removeCommand, writeObject`

Methods inherited from class ru.biosoft.access.AbstractTransformer
`getPrimaryCollection, getTransformedCollection, isInputType, isOutputType`

Methods inherited from class java.lang.Object
`clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait`

Field Detail

### kineticLawTransformer

    protected BeanInfoEntryTransformer kineticLawTransformer

### specieReferenceTransformer

    protected BeanInfoEntryTransformer specieReferenceTransformer

Constructor Detail

### ReactionTransformer

    public ReactionTransformer()

Method Detail

### init

    public void init(DataCollection primaryCollection,
                     DataCollection transformedCollection)

  Description copied from class: `BeanInfoEntryTransformer`
  Initialize transformer.

  Specified by:
    `init` in interface `Transformer`
  Overrides:
    `init` in class `BeanInfoEntryTransformer`
  See Also:
    `AbstractTransformer.getPrimaryCollection()`, `AbstractTransformer.getTransformedCollection()`

### readSection

    protected java.lang.String readSection(java.io.BufferedReader reader)
                                    throws java.lang.Exception

  Throws:
    `java.lang.Exception`

### transformInput

    public DataElement transformInput(DataElement input)
                               throws java.lang.Exception

  Read Reaction object from Entry object.

  Specified by:
    `transformInput` in interface `Transformer`
  Overrides:
    `transformInput` in class `TagEntryTransformer`
  Throws:
    `java.lang.Exception`

### transformOutput

    public DataElement transformOutput(DataElement input)
                                throws java.lang.Exception

  Write Reaction object to Entry object.

  Specified by:
    `transformOutput` in interface `Transformer`
  Overrides:
    `transformOutput` in class `TagEntryTransformer`
  Throws:
    `java.lang.Exception`

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