Uses of Base in biouml.model

 

Constructors in biouml.model with parameters of type Base

Compartment.Compartment(DataCollection parent, Base kernel)

Compartment.Compartment(DataCollection parent, String id, Base kernel)

Diagram.Diagram(DataCollection origin, Base kernel, DiagramType type)           Creates the diagram of the specified type.

DiagramElement.DiagramElement(DataCollection parent, Base kernel)           Constructs the diagram element.

DiagramElement.DiagramElement(DataCollection parent, String name, Base kernel)           Constructs the diagram element.

Edge.Edge(DataCollection parent, Base kernel, Node input, Node output)

Edge.Edge(DataCollection parent, String id, Base kernel, Node input, Node output)

Node.Node(DataCollection parent, Base kernel)

Node.Node(DataCollection parent, String name, Base kernel)

 

Methods in biouml.model that return Base
Base	DiagramElement.getKernel()
Base[]	EquivalentNodeGroup.getKernels()           We would like to get access for kernels through the property to display it in property inspector.
Base[]	QueryEngine.searchKernel(Class aClass, String name, boolean isRegexp)

 

Methods in biouml.model with parameters of type Base
DiagramElement	DefaultSemanticController.createDiagramElement(Base kernel, Set elements)
void	Diagram.setKernel(Base newKernel)
void	DiagramElement.setKernel(Base kernel)
DiagramElement	SemanticController.createDiagramElement(Base kernel, Set elements)

 

Uses of Base in biouml.modules.genenet

 

Methods in biouml.modules.genenet that return Base
Base[]	GeneNetQueryEngine.searchKernel(Class aClass, String name, boolean isRegexp)

 

Methods in biouml.modules.genenet with parameters of type Base
DiagramElement	GeneNetSemanticController.createDiagramElement(Base kernel, Set elements)

 

Uses of Base in biouml.modules.kegg

 

Methods in biouml.modules.kegg that return Base
Base[]	KeggPathwayQueryEngine.searchKernel(Class aClass, String name, boolean isRegexp)

 

Methods in biouml.modules.kegg with parameters of type Base
DiagramElement	KeggPathwaySemanticController.createDiagramElement(Base kernel, Set elements)

 

Uses of Base in biouml.modules.transpath

 

Methods in biouml.modules.transpath that return Base
Base[]	TranspathQueryEngine.searchKernel(Class aClass, String name, boolean isRegexp)

 

Methods in biouml.modules.transpath with parameters of type Base
DiagramElement	TranspathSemanticController.createDiagramElement(Base kernel, Set elements)

 

Uses of Base in biouml.standard

 

Methods in biouml.standard that return Base
Base[]	StandardQueryEngine.searchKernel(Class aClass, String name, boolean isRegexp)

 

Uses of Base in biouml.standard.diagram.pathway

 

Methods in biouml.standard.diagram.pathway with parameters of type Base
boolean	PathwayDiagramViewBuilder.isReaction(Base kernel)
DiagramElement	PathwaySemanticController.createDiagramElement(Base kernel, Set elements)

 

Uses of Base in biouml.standard.type

 

Classes in biouml.standard.type that implement Base
class	BaseSupport           Base class for all data element types.