Uses of Node in biouml.editor

 

Constructors in biouml.editor with parameters of type Node

NodeInfo.NodeInfo(Node initNode)

 

Methods in biouml.editor that return Node
Node	NewDiagramElementDialog.getNode()
Node	NodeInfo.getNode()

 

Methods in biouml.editor with parameters of type Node
static boolean	DiagramEditorHelper.moveNode(Node newNode, Node oldNode)
static void	DiagramEditorHelper.removeMovedNode(Node node)
void	SearchLinkedPanel.setLinkedNodes(Node[] linkedNodes)
void	SearchLinkedPanel.setSelectedNode(Node selectedNode)
void	SearchLinkedPanel.showLinkedNodes(Node[] nodes)

 

Uses of Node in biouml.editor.graphlayout

 

Methods in biouml.editor.graphlayout with parameters of type Node
void	CellLayoutManager.layout(Diagram diagram, Node root, Node[] addedNodes, Node selectedNode)
void	ForceDirectedLayoutManager.layout(Diagram diagram, Node center, Node selectedNode)
void	ForceDirectedLayoutManager.layout(Diagram diagram, Node root, Node[] addedNodes, Node selectedNode)
void	GraphLayout.layout(Diagram diagram, Node center, Node selectedNode)
void	GraphLayout.layout(Diagram diagram, Node center, Node[] nodes, Node selectedNode)
void	LayeredLayoutManager.layout(Diagram diagram, Node center, Node selectedNode)
void	LayeredLayoutManager.layout(Diagram diagram, Node root, Node[] addedNodes, Node selectedNode)
void	LayeredOptimizedLayoutManager.layout(Diagram diagram, Node center, Node selectedNode)
void	LayeredOptimizedLayoutManager.layout(Diagram diagram, Node root, Node[] addedNodes, Node selectedNode)

 

Uses of Node in biouml.model

 

Subclasses of Node in biouml.model
class	Compartment           General definition of the compartment as a container for nodes and edges between them.

 

Constructors in biouml.model with parameters of type Node

Edge.Edge(DataCollection parent, Base kernel, Node input, Node output)

Edge.Edge(DataCollection parent, String id, Base kernel, Node input, Node output)

 

Methods in biouml.model that return Node
Node	Compartment.findNode(String id)
Node	Edge.getInput()
Node	Edge.getOutput()
Node	EquivalentNodeGroup.getRepresentative()
Node[]	QueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	QueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	QueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Methods in biouml.model with parameters of type Node
CompositeView	DefaultDiagramViewBuilder.createNodeView(Node node, DiagramViewOptions options, Graphics g)
void	DefaultDiagramViewBuilder.highlightNode(Node node, Filter filter, Brush brush)
void	DefaultDiagramViewBuilder.moveNode(Node node, Point newLocation)
CompositeView	DiagramViewBuilder.createNodeView(Node node, DiagramViewOptions options, Graphics g)
void	DiagramViewBuilder.moveNode(Node node, Point newLocation)
Node[]	QueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	QueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	QueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Uses of Node in biouml.model.dynamics

 

Methods in biouml.model.dynamics with parameters of type Node
CompositeView	EModelDiagramViewBuilder.createNodeView(Node node, DiagramViewOptions options, Graphics g)

 

Uses of Node in biouml.modules.genenet

 

Methods in biouml.modules.genenet that return Node
Node[]	GeneNetQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	GeneNetQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	GeneNetQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Methods in biouml.modules.genenet with parameters of type Node
Node[]	GeneNetQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	GeneNetQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	GeneNetQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Uses of Node in biouml.modules.kegg

 

Methods in biouml.modules.kegg that return Node
Node[]	KeggPathwayQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	KeggPathwayQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	KeggPathwayQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Methods in biouml.modules.kegg with parameters of type Node
Node[]	KeggPathwayQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	KeggPathwayQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	KeggPathwayQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Uses of Node in biouml.modules.transpath

 

Methods in biouml.modules.transpath that return Node
Node[]	TranspathQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	TranspathQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	TranspathQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Methods in biouml.modules.transpath with parameters of type Node
Node[]	TranspathQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	TranspathQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	TranspathQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Uses of Node in biouml.standard

 

Methods in biouml.standard that return Node
Node[]	StandardQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	StandardQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	StandardQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Methods in biouml.standard with parameters of type Node
Node[]	StandardQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller, Set elements)
Node[]	StandardQueryEngine.searchLinked(Diagram diagram, Node node, int direction, SemanticController controller)
Node[]	StandardQueryEngine.searchLinked(Diagram diagram, Node node, int direction, int depth, SemanticController controller)

 

Uses of Node in biouml.standard.diagram.pathway

 

Methods in biouml.standard.diagram.pathway with parameters of type Node
CompositeView	PathwayDiagramViewBuilder.createNodeView(Node node, DiagramViewOptions options, Graphics g)